Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAM1L1Q8N609 AC012313.1-201ENST00000593393 3059 ntBASIC16.71■□□□□ 0.26
TRAM1L1Q8N609 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAM1L1Q8N609 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAM1L1Q8N609 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 AL391256.1-201ENST00000443260 1855 ntBASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 HMGA1P7-201ENST00000406908 502 ntBASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 CYP2A7P1-201ENST00000595391 815 ntBASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAM1L1Q8N609 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 MCCD1P2-201ENST00000423228 335 ntBASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 AL645728.1-201ENST00000366221 2101 ntBASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAM1L1Q8N609 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 AC080080.1-201ENST00000625121 2420 ntBASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRAM1L1Q8N609 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms