Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 AC004233.3-201ENST00000607794 1269 ntBASIC18.27■□□□□ 0.52
HERC6Q8IVU3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 AL590560.3-201ENST00000623350 461 ntBASIC18.27■□□□□ 0.52
HERC6Q8IVU3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HERC6Q8IVU3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.27■□□□□ 0.51
HERC6Q8IVU3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HERC6Q8IVU3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HERC6Q8IVU3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 TSSK5P-201ENST00000423978 907 ntBASIC18.26■□□□□ 0.51
HERC6Q8IVU3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.26■□□□□ 0.51
HERC6Q8IVU3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 AL353732.1-201ENST00000569618 1459 ntBASIC18.25■□□□□ 0.51
HERC6Q8IVU3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.25■□□□□ 0.51
HERC6Q8IVU3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HERC6Q8IVU3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms