Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 AL645728.1-201ENST00000366221 2101 ntBASIC15.03■□□□□ -0
LINC00346Q8IVM7 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 AC064862.7-201ENST00000604520 867 ntBASIC15.03■□□□□ -0
LINC00346Q8IVM7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
LINC00346Q8IVM7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LINC00346Q8IVM7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 AL603756.1-201ENST00000606511 2163 ntBASIC15.02■□□□□ -0
LINC00346Q8IVM7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 TUBB8P12-201ENST00000308911 1335 ntBASIC15.02■□□□□ -0
LINC00346Q8IVM7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 TUBB7P-202ENST00000428444 1305 ntBASIC15.02■□□□□ -0
LINC00346Q8IVM7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 TUBB8P7-204ENST00000567960 1332 ntBASIC15.02■□□□□ -0
LINC00346Q8IVM7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 AL662844.4-201ENST00000606367 2838 ntBASIC15.02■□□□□ -0
LINC00346Q8IVM7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.02■□□□□ -0
LINC00346Q8IVM7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 AC106795.1-205ENST00000512851 1056 ntBASIC15.02■□□□□ -0
LINC00346Q8IVM7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 MTDHP3-201ENST00000594186 672 ntBASIC15.02■□□□□ -0
LINC00346Q8IVM7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.02■□□□□ -0
LINC00346Q8IVM7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LINC00346Q8IVM7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC00346Q8IVM7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms