Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 AP002414.1-201ENST00000391405 1147 ntBASIC17.65■□□□□ 0.42
RFX6Q8HWS3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 TSPY19P-201ENST00000418461 509 ntBASIC17.65■□□□□ 0.42
RFX6Q8HWS3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 TSPY18P-201ENST00000441642 509 ntBASIC17.65■□□□□ 0.42
RFX6Q8HWS3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 DUX4L17-201ENST00000557360 1267 ntBASIC17.65■□□□□ 0.42
RFX6Q8HWS3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 AL355877.3-201ENST00000622820 899 ntBASIC17.65■□□□□ 0.42
RFX6Q8HWS3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.65■□□□□ 0.42
RFX6Q8HWS3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFX6Q8HWS3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX6Q8HWS3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
RFX6Q8HWS3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX6Q8HWS3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RFX6Q8HWS3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 AL645728.1-201ENST00000366221 2101 ntBASIC17.64■□□□□ 0.41
RFX6Q8HWS3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 FGFR3P6-201ENST00000457012 610 ntBASIC17.64■□□□□ 0.41
RFX6Q8HWS3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 SART3-203ENST00000546611 1184 ntBASIC17.64■□□□□ 0.41
RFX6Q8HWS3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
RFX6Q8HWS3 PCDHB19P-201ENST00000570871 2371 ntBASIC17.64■□□□□ 0.41
RFX6Q8HWS3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.63■□□□□ 0.41
RFX6Q8HWS3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms