Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 AC009533.2-201ENST00000543664 586 ntBASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 MIR3652-201ENST00000579335 131 ntBASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 AC114341.1-201ENST00000618070 349 ntBASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.27■□□□□ 0.04
RFPL4BQ6ZWI9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RFPL4BQ6ZWI9 AC026691.1-201ENST00000602502 2017 ntBASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 AL122018.1-201ENST00000446607 2310 ntBASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 COX5BP2-201ENST00000392354 334 ntBASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 FAM220CP-201ENST00000395253 831 ntBASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 AC011467.2-201ENST00000598425 242 ntBASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RFPL4BQ6ZWI9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 AC012313.10-201ENST00000623509 926 ntBASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFPL4BQ6ZWI9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms