Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 AL627223.1-201ENST00000416693 442 ntBASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 SPCS2P1-201ENST00000561636 679 ntBASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 MIR4492-201ENST00000581627 80 ntBASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 AL031055.1-201ENST00000606362 631 ntBASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DCLRE1AQ6PJP8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 AC025678.2-201ENST00000562061 970 ntBASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.02■□□□□ 0.48
DCLRE1AQ6PJP8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DCLRE1AQ6PJP8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 CYP2A7P1-201ENST00000595391 815 ntBASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 AC239800.4-201ENST00000603712 296 ntBASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 LINC00628-201ENST00000628516 1289 ntBASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DCLRE1AQ6PJP8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms