Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SWSAP1Q6NVH7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 TUBB8P12-201ENST00000308911 1335 ntBASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 TUBB7P-202ENST00000428444 1305 ntBASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 KRT18P28-201ENST00000453838 1332 ntBASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 TUBB8P7-204ENST00000567960 1332 ntBASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 AC092474.2-201ENST00000424288 719 ntBASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 AP000344.2-201ENST00000512987 629 ntBASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 CYP2A7P1-201ENST00000595391 815 ntBASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 AC026120.1-201ENST00000611536 926 ntBASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SWSAP1Q6NVH7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 RNU1-129P-201ENST00000384064 167 ntBASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 PMS2P2-201ENST00000425039 1128 ntBASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 TIMM8BP1-201ENST00000452384 211 ntBASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 KRT8P48-201ENST00000515599 1220 ntBASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 U1.21-201ENST00000580816 167 ntBASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 AC022145.2-201ENST00000598203 171 ntBASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SWSAP1Q6NVH7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 TFAMP1-201ENST00000412727 736 ntBASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 FAM86C2P-203ENST00000528684 1004 ntBASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 AC004835.2-201ENST00000603762 682 ntBASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 AC027612.4-201ENST00000605371 583 ntBASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 AL031055.1-201ENST00000606362 631 ntBASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 AL161645.1-201ENST00000622716 1255 ntBASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 PCDHB17P-201ENST00000539533 2393 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms