Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 AC132008.2-207ENST00000454517 770 ntBASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 LINC01711-201ENST00000598340 967 ntBASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 AC007950.2-201ENST00000615045 2347 ntBASIC17.29■□□□□ 0.36
CAPRIN2Q6IMN6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 BX276092.7-203ENST00000637198 1536 ntBASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
CAPRIN2Q6IMN6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CAPRIN2Q6IMN6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CAPRIN2Q6IMN6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms