Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 NUDT16P1-203ENST00000513809 620 ntBASIC16.01■□□□□ 0.15
LPCAT4Q643R3 C1QBPP2-201ENST00000528754 825 ntBASIC16.01■□□□□ 0.15
LPCAT4Q643R3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 FAM45BP-202ENST00000592932 1624 ntBASIC16.01■□□□□ 0.15
LPCAT4Q643R3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16■□□□□ 0.15
LPCAT4Q643R3 PRAL-201ENST00000624952 3286 ntBASIC16■□□□□ 0.15
LPCAT4Q643R3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16■□□□□ 0.15
LPCAT4Q643R3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16■□□□□ 0.15
LPCAT4Q643R3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 AC063926.3-201ENST00000624734 5658 ntBASIC16■□□□□ 0.15
LPCAT4Q643R3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LPCAT4Q643R3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16■□□□□ 0.15
LPCAT4Q643R3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LPCAT4Q643R3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16■□□□□ 0.15
LPCAT4Q643R3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LPCAT4Q643R3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16■□□□□ 0.15
LPCAT4Q643R3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LPCAT4Q643R3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LPCAT4Q643R3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
LPCAT4Q643R3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16■□□□□ 0.15
LPCAT4Q643R3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16■□□□□ 0.15
LPCAT4Q643R3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16■□□□□ 0.15
LPCAT4Q643R3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LPCAT4Q643R3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.99■□□□□ 0.15
LPCAT4Q643R3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 MIR3917-201ENST00000580971 93 ntBASIC15.99■□□□□ 0.15
LPCAT4Q643R3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LPCAT4Q643R3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.98■□□□□ 0.15
LPCAT4Q643R3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms