Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 AC092337.1-201ENST00000568699 1129 ntBASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 TUBB1P2-201ENST00000422712 1306 ntBASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 TUBB1P1-201ENST00000503144 1300 ntBASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC27.22■■□□□ 1.95
SNAPC4Q5SXM2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 RRP7BP-205ENST00000566851 833 ntBASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 PDIA3P1-201ENST00000471856 1510 ntBASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC27.21■■□□□ 1.95
SNAPC4Q5SXM2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SNAPC4Q5SXM2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
SNAPC4Q5SXM2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC27.2■■□□□ 1.95
SNAPC4Q5SXM2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC27.2■■□□□ 1.95
SNAPC4Q5SXM2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC27.2■■□□□ 1.95
SNAPC4Q5SXM2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
SNAPC4Q5SXM2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
SNAPC4Q5SXM2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SNAPC4Q5SXM2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC27.2■■□□□ 1.94
SNAPC4Q5SXM2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC27.2■■□□□ 1.94
SNAPC4Q5SXM2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC27.2■■□□□ 1.94
SNAPC4Q5SXM2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
SNAPC4Q5SXM2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC27.2■■□□□ 1.94
SNAPC4Q5SXM2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNAPC4Q5SXM2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNAPC4Q5SXM2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNAPC4Q5SXM2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 MIR8072-201ENST00000614241 80 ntBASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC27.19■■□□□ 1.94
SNAPC4Q5SXM2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 AC093525.8-201ENST00000624099 1342 ntBASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 AC108725.1-201ENST00000495472 409 ntBASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNAPC4Q5SXM2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNAPC4Q5SXM2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms