Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 SLC22A20-204ENST00000530038 1673 ntBASIC17.4■□□□□ 0.38
ALFQ53S48 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ALFQ53S48 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ALFQ53S48 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.4■□□□□ 0.38
ALFQ53S48 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.4■□□□□ 0.38
ALFQ53S48 AL513480.1-201ENST00000451731 511 ntBASIC17.4■□□□□ 0.38
ALFQ53S48 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALFQ53S48 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.4■□□□□ 0.38
ALFQ53S48 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.4■□□□□ 0.38
ALFQ53S48 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.4■□□□□ 0.38
ALFQ53S48 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.4■□□□□ 0.38
ALFQ53S48 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
ALFQ53S48 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.4■□□□□ 0.38
ALFQ53S48 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.4■□□□□ 0.38
ALFQ53S48 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.4■□□□□ 0.38
ALFQ53S48 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALFQ53S48 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ALFQ53S48 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ALFQ53S48 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALFQ53S48 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ALFQ53S48 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
ALFQ53S48 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALFQ53S48 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALFQ53S48 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.39■□□□□ 0.38
ALFQ53S48 AC025580.3-201ENST00000617932 1424 ntBASIC17.39■□□□□ 0.38
ALFQ53S48 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.39■□□□□ 0.37
ALFQ53S48 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.39■□□□□ 0.37
ALFQ53S48 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 AC005915.1-201ENST00000624912 2018 ntBASIC17.39■□□□□ 0.37
ALFQ53S48 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ALFQ53S48 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.39■□□□□ 0.37
ALFQ53S48 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.39■□□□□ 0.37
ALFQ53S48 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.39■□□□□ 0.37
ALFQ53S48 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.39■□□□□ 0.37
ALFQ53S48 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.39■□□□□ 0.37
ALFQ53S48 KRT19P2-202ENST00000557173 1012 ntBASIC17.39■□□□□ 0.37
ALFQ53S48 AC040169.1-201ENST00000565382 521 ntBASIC17.39■□□□□ 0.37
ALFQ53S48 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.39■□□□□ 0.37
ALFQ53S48 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.39■□□□□ 0.37
ALFQ53S48 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.39■□□□□ 0.37
ALFQ53S48 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ALFQ53S48 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ALFQ53S48 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.39■□□□□ 0.37
ALFQ53S48 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 AL121761.2-201ENST00000598007 1648 ntBASIC17.39■□□□□ 0.37
ALFQ53S48 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ALFQ53S48 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALFQ53S48 CROCCP1-201ENST00000426910 5675 ntBASIC17.38■□□□□ 0.37
ALFQ53S48 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.38■□□□□ 0.37
ALFQ53S48 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
ALFQ53S48 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.38■□□□□ 0.37
ALFQ53S48 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.38■□□□□ 0.37
ALFQ53S48 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.38■□□□□ 0.37
ALFQ53S48 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
ALFQ53S48 AC023141.13-201ENST00000604991 943 ntBASIC17.38■□□□□ 0.37
ALFQ53S48 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.38■□□□□ 0.37
ALFQ53S48 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALFQ53S48 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
ALFQ53S48 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms