Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HMGCS1Q01581 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HMGCS1Q01581 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 AP002414.1-201ENST00000391405 1147 ntBASIC16.35■□□□□ 0.21
HMGCS1Q01581 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 AC106795.1-205ENST00000512851 1056 ntBASIC16.35■□□□□ 0.21
HMGCS1Q01581 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 MIR3652-201ENST00000579335 131 ntBASIC16.35■□□□□ 0.21
HMGCS1Q01581 NKAPP1-205ENST00000585790 367 ntBASIC16.35■□□□□ 0.21
HMGCS1Q01581 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 AL590787.1-201ENST00000568856 1315 ntBASIC16.35■□□□□ 0.21
HMGCS1Q01581 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 AC243591.1-201ENST00000452967 1364 ntBASIC16.35■□□□□ 0.21
HMGCS1Q01581 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.35■□□□□ 0.21
HMGCS1Q01581 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HMGCS1Q01581 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 AP002490.2-201ENST00000524791 560 ntBASIC16.34■□□□□ 0.21
HMGCS1Q01581 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms