Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 ZNF815P-204ENST00000434898 1737 ntBASIC14.06□□□□□ -0.16
RIPPLY3P57055 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 AL138781.2-201ENST00000617896 1843 ntBASIC14.06□□□□□ -0.16
RIPPLY3P57055 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RIPPLY3P57055 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.06□□□□□ -0.16
RIPPLY3P57055 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 PFN1P12-201ENST00000455938 534 ntBASIC14.05□□□□□ -0.16
RIPPLY3P57055 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 AL135744.1-201ENST00000565098 629 ntBASIC14.05□□□□□ -0.16
RIPPLY3P57055 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RIPPLY3P57055 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 UXT-AS1-201ENST00000590504 1525 ntBASIC14.05□□□□□ -0.16
RIPPLY3P57055 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.05□□□□□ -0.16
RIPPLY3P57055 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIPPLY3P57055 AL513480.1-201ENST00000451731 511 ntBASIC14.04□□□□□ -0.16
RIPPLY3P57055 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.04□□□□□ -0.16
RIPPLY3P57055 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms