Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HMGCS2P54868 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS2P54868 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGCS2P54868 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGCS2P54868 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HMGCS2P54868 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.42■□□□□ 0.7
HMGCS2P54868 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS2P54868 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HMGCS2P54868 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.42■□□□□ 0.7
HMGCS2P54868 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HMGCS2P54868 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 TSSK5P-201ENST00000423978 907 ntBASIC19.41■□□□□ 0.7
HMGCS2P54868 CRB3P1-201ENST00000449338 276 ntBASIC19.41■□□□□ 0.7
HMGCS2P54868 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.41■□□□□ 0.7
HMGCS2P54868 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HMGCS2P54868 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.41■□□□□ 0.7
HMGCS2P54868 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HMGCS2P54868 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.41■□□□□ 0.7
HMGCS2P54868 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HMGCS2P54868 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HMGCS2P54868 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGCS2P54868 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGCS2P54868 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HMGCS2P54868 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.4■□□□□ 0.7
HMGCS2P54868 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.4■□□□□ 0.7
HMGCS2P54868 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.4■□□□□ 0.7
HMGCS2P54868 GAPDHP21-201ENST00000450301 1010 ntBASIC19.4■□□□□ 0.7
HMGCS2P54868 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.4■□□□□ 0.7
HMGCS2P54868 AC073389.1-201ENST00000595595 795 ntBASIC19.4■□□□□ 0.7
HMGCS2P54868 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.4■□□□□ 0.7
HMGCS2P54868 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HMGCS2P54868 AC134043.2-201ENST00000624206 2238 ntBASIC19.4■□□□□ 0.7
HMGCS2P54868 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HMGCS2P54868 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HMGCS2P54868 AL138688.1-201ENST00000624851 1594 ntBASIC19.4■□□□□ 0.7
HMGCS2P54868 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.4■□□□□ 0.7
HMGCS2P54868 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGCS2P54868 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.39■□□□□ 0.7
HMGCS2P54868 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGCS2P54868 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
HMGCS2P54868 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
HMGCS2P54868 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCS2P54868 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
HMGCS2P54868 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
HMGCS2P54868 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGCS2P54868 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 AC007967.4-201ENST00000614700 386 ntBASIC19.39■□□□□ 0.69
HMGCS2P54868 AL138828.2-201ENST00000615812 383 ntBASIC19.39■□□□□ 0.69
HMGCS2P54868 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HMGCS2P54868 FOXO1B-201ENST00000504678 1527 ntBASIC19.39■□□□□ 0.69
HMGCS2P54868 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HMGCS2P54868 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HMGCS2P54868 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms