Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 AC129492.6-201ENST00000611383 1305 ntBASIC20.65■□□□□ 0.9
PDE1AP54750 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.65■□□□□ 0.9
PDE1AP54750 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.65■□□□□ 0.9
PDE1AP54750 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE1AP54750 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PDE1AP54750 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PDE1AP54750 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE1AP54750 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PDE1AP54750 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
PDE1AP54750 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
PDE1AP54750 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE1AP54750 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE1AP54750 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE1AP54750 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE1AP54750 AC131009.4-201ENST00000624048 1740 ntBASIC20.64■□□□□ 0.9
PDE1AP54750 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDE1AP54750 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.64■□□□□ 0.9
PDE1AP54750 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.64■□□□□ 0.9
PDE1AP54750 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PDE1AP54750 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.64■□□□□ 0.89
PDE1AP54750 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.64■□□□□ 0.89
PDE1AP54750 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 HLA-J-202ENST00000469281 1241 ntBASIC20.64■□□□□ 0.89
PDE1AP54750 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE1AP54750 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.64■□□□□ 0.89
PDE1AP54750 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.64■□□□□ 0.89
PDE1AP54750 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE1AP54750 AP001005.1-201ENST00000571755 1248 ntBASIC20.64■□□□□ 0.89
PDE1AP54750 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.64■□□□□ 0.89
PDE1AP54750 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PDE1AP54750 AC091167.2-201ENST00000579581 588 ntBASIC20.64■□□□□ 0.89
PDE1AP54750 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE1AP54750 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1AP54750 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PDE1AP54750 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE1AP54750 MRPL20P1-201ENST00000400819 433 ntBASIC20.63■□□□□ 0.89
PDE1AP54750 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1AP54750 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE1AP54750 IGHV3-22-201ENST00000520721 359 ntBASIC20.63■□□□□ 0.89
PDE1AP54750 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1AP54750 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.63■□□□□ 0.89
PDE1AP54750 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PDE1AP54750 AL662844.1-201ENST00000546340 181 ntBASIC20.63■□□□□ 0.89
PDE1AP54750 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1AP54750 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.63■□□□□ 0.89
PDE1AP54750 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE1AP54750 OR6D1P-202ENST00000641007 5290 ntBASIC20.63■□□□□ 0.89
PDE1AP54750 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PDE1AP54750 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1AP54750 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.63■□□□□ 0.89
PDE1AP54750 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
PDE1AP54750 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE1AP54750 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDE1AP54750 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1AP54750 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE1AP54750 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1AP54750 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1AP54750 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.62■□□□□ 0.89
PDE1AP54750 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE1AP54750 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1AP54750 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE1AP54750 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PDE1AP54750 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE1AP54750 UNC93B6-202ENST00000528242 690 ntBASIC20.62■□□□□ 0.89
PDE1AP54750 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms