Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.38■□□□□ 0.37
ATXN3P54252 AC073592.5-201ENST00000624854 528 ntBASIC17.38■□□□□ 0.37
ATXN3P54252 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATXN3P54252 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.38■□□□□ 0.37
ATXN3P54252 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
ATXN3P54252 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 KRT8P47-201ENST00000604727 1398 ntBASIC17.38■□□□□ 0.37
ATXN3P54252 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATXN3P54252 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.38■□□□□ 0.37
ATXN3P54252 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.37■□□□□ 0.37
ATXN3P54252 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ATXN3P54252 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.37■□□□□ 0.37
ATXN3P54252 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 MIR770-201ENST00000390219 98 ntBASIC17.37■□□□□ 0.37
ATXN3P54252 AL020989.1-201ENST00000422979 469 ntBASIC17.37■□□□□ 0.37
ATXN3P54252 VN2R19P-201ENST00000442399 1052 ntBASIC17.37■□□□□ 0.37
ATXN3P54252 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.37■□□□□ 0.37
ATXN3P54252 AC018845.2-201ENST00000568326 409 ntBASIC17.37■□□□□ 0.37
ATXN3P54252 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.37■□□□□ 0.37
ATXN3P54252 AL078644.1-201ENST00000609881 752 ntBASIC17.37■□□□□ 0.37
ATXN3P54252 AL513190.1-201ENST00000621254 727 ntBASIC17.37■□□□□ 0.37
ATXN3P54252 AD001527.2-201ENST00000622994 785 ntBASIC17.37■□□□□ 0.37
ATXN3P54252 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.37■□□□□ 0.37
ATXN3P54252 AC092865.6-201ENST00000642101 219 ntBASIC17.37■□□□□ 0.37
ATXN3P54252 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.37■□□□□ 0.37
ATXN3P54252 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.37■□□□□ 0.37
ATXN3P54252 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.37■□□□□ 0.37
ATXN3P54252 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATXN3P54252 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ATXN3P54252 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATXN3P54252 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.37■□□□□ 0.37
ATXN3P54252 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATXN3P54252 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATXN3P54252 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.37■□□□□ 0.37
ATXN3P54252 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.36■□□□□ 0.37
ATXN3P54252 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.36■□□□□ 0.37
ATXN3P54252 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.36■□□□□ 0.37
ATXN3P54252 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATXN3P54252 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.36■□□□□ 0.37
ATXN3P54252 AC004706.3-202ENST00000621574 984 ntBASIC17.36■□□□□ 0.37
ATXN3P54252 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 ELL2P1-201ENST00000413990 1906 ntBASIC17.36■□□□□ 0.37
ATXN3P54252 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATXN3P54252 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.36■□□□□ 0.37
ATXN3P54252 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.36■□□□□ 0.37
ATXN3P54252 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ATXN3P54252 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.36■□□□□ 0.37
ATXN3P54252 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATXN3P54252 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATXN3P54252 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
ATXN3P54252 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms