Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC23.9■■□□□ 1.42
CLTCL1P53675 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC23.9■■□□□ 1.42
CLTCL1P53675 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CLTCL1P53675 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.9■■□□□ 1.42
CLTCL1P53675 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CLTCL1P53675 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC23.9■■□□□ 1.42
CLTCL1P53675 AC060834.1-201ENST00000443027 2032 ntBASIC23.9■■□□□ 1.42
CLTCL1P53675 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLTCL1P53675 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CLTCL1P53675 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLTCL1P53675 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLTCL1P53675 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC23.9■■□□□ 1.42
CLTCL1P53675 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CLTCL1P53675 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC23.9■■□□□ 1.42
CLTCL1P53675 AC010336.2-201ENST00000564226 506 ntBASIC23.9■■□□□ 1.42
CLTCL1P53675 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC23.9■■□□□ 1.42
CLTCL1P53675 SPTSSB-204ENST00000617024 1292 ntBASIC23.9■■□□□ 1.42
CLTCL1P53675 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLTCL1P53675 GGT4P-201ENST00000623672 1708 ntBASIC23.9■■□□□ 1.42
CLTCL1P53675 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLTCL1P53675 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CLTCL1P53675 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CLTCL1P53675 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CLTCL1P53675 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CLTCL1P53675 CETN4P-206ENST00000642099 2168 ntBASIC23.89■■□□□ 1.42
CLTCL1P53675 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLTCL1P53675 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC23.89■■□□□ 1.42
CLTCL1P53675 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC23.89■■□□□ 1.42
CLTCL1P53675 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC23.89■■□□□ 1.42
CLTCL1P53675 PUDP-206ENST00000540122 825 ntTSL 2 BASIC23.89■■□□□ 1.42
CLTCL1P53675 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLTCL1P53675 AL512361.1-201ENST00000554200 418 ntBASIC23.89■■□□□ 1.42
CLTCL1P53675 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC23.89■■□□□ 1.42
CLTCL1P53675 LITAF-210ENST00000571976 548 ntTSL 2 BASIC23.89■■□□□ 1.42
CLTCL1P53675 LITAF-214ENST00000574703 486 ntTSL 2 BASIC23.89■■□□□ 1.42
CLTCL1P53675 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CLTCL1P53675 AL132655.2-201ENST00000596276 594 ntBASIC23.89■■□□□ 1.42
CLTCL1P53675 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
CLTCL1P53675 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CLTCL1P53675 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLTCL1P53675 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CLTCL1P53675 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
CLTCL1P53675 PC-204ENST00000524491 1714 ntTSL 2 BASIC23.89■■□□□ 1.41
CLTCL1P53675 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC23.89■■□□□ 1.41
CLTCL1P53675 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CLTCL1P53675 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.89■■□□□ 1.41
CLTCL1P53675 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CLTCL1P53675 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC23.88■■□□□ 1.41
CLTCL1P53675 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 SPDYE18-201ENST00000510091 1050 ntBASIC23.88■■□□□ 1.41
CLTCL1P53675 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC23.88■■□□□ 1.41
CLTCL1P53675 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC23.88■■□□□ 1.41
CLTCL1P53675 FHL2-212ENST00000607522 759 ntTSL 2 BASIC23.88■■□□□ 1.41
CLTCL1P53675 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 CENPM-206ENST00000407253 818 ntTSL 2 BASIC23.88■■□□□ 1.41
CLTCL1P53675 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 MTND6P24-201ENST00000440466 518 ntBASIC23.88■■□□□ 1.41
CLTCL1P53675 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLTCL1P53675 STOM-203ENST00000538954 1257 ntTSL 5 BASIC23.88■■□□□ 1.41
CLTCL1P53675 AC009407.1-201ENST00000568958 598 ntBASIC23.88■■□□□ 1.41
CLTCL1P53675 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
CLTCL1P53675 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC23.88■■□□□ 1.41
CLTCL1P53675 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC23.88■■□□□ 1.41
CLTCL1P53675 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CLTCL1P53675 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC23.87■■□□□ 1.41
CLTCL1P53675 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLTCL1P53675 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLTCL1P53675 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CLTCL1P53675 AL035456.1-201ENST00000456064 1369 ntBASIC23.87■■□□□ 1.41
CLTCL1P53675 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLTCL1P53675 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLTCL1P53675 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CLTCL1P53675 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLTCL1P53675 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC23.87■■□□□ 1.41
CLTCL1P53675 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC23.87■■□□□ 1.41
CLTCL1P53675 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.87■■□□□ 1.41
CLTCL1P53675 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC23.87■■□□□ 1.41
CLTCL1P53675 ZNF890P-202ENST00000530367 1156 ntBASIC23.87■■□□□ 1.41
CLTCL1P53675 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC23.87■■□□□ 1.41
CLTCL1P53675 AC061975.2-201ENST00000581722 295 ntBASIC23.87■■□□□ 1.41
CLTCL1P53675 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC23.87■■□□□ 1.41
CLTCL1P53675 RAB34-223ENST00000636154 730 ntTSL 2 BASIC23.87■■□□□ 1.41
CLTCL1P53675 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC23.87■■□□□ 1.41
CLTCL1P53675 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CLTCL1P53675 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTCL1P53675 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC23.86■■□□□ 1.41
CLTCL1P53675 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTCL1P53675 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLTCL1P53675 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
CLTCL1P53675 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC23.86■■□□□ 1.41
CLTCL1P53675 AC104794.3-201ENST00000566840 1248 ntBASIC23.86■■□□□ 1.41
CLTCL1P53675 RN7SL828P-201ENST00000607615 303 ntBASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms