Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.69■□□□□ 0.58
BRCA2P51587 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRCA2P51587 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRCA2P51587 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRCA2P51587 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.69■□□□□ 0.58
BRCA2P51587 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.69■□□□□ 0.58
BRCA2P51587 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.69■□□□□ 0.58
BRCA2P51587 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.69■□□□□ 0.58
BRCA2P51587 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRCA2P51587 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.69■□□□□ 0.58
BRCA2P51587 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.69■□□□□ 0.58
BRCA2P51587 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BRCA2P51587 AC093525.8-201ENST00000624099 1342 ntBASIC18.68■□□□□ 0.58
BRCA2P51587 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 AC092506.1-202ENST00000401022 528 ntBASIC18.68■□□□□ 0.58
BRCA2P51587 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.68■□□□□ 0.58
BRCA2P51587 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.68■□□□□ 0.58
BRCA2P51587 RN7SL190P-201ENST00000582519 257 ntBASIC18.68■□□□□ 0.58
BRCA2P51587 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRCA2P51587 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.68■□□□□ 0.58
BRCA2P51587 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
BRCA2P51587 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.68■□□□□ 0.58
BRCA2P51587 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCA2P51587 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BRCA2P51587 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.68■□□□□ 0.58
BRCA2P51587 AC087499.6-201ENST00000411576 835 ntBASIC18.68■□□□□ 0.58
BRCA2P51587 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.68■□□□□ 0.58
BRCA2P51587 MYCLP2-201ENST00000449268 967 ntBASIC18.68■□□□□ 0.58
BRCA2P51587 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BRCA2P51587 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
BRCA2P51587 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 AC108725.1-201ENST00000495472 409 ntBASIC18.68■□□□□ 0.58
BRCA2P51587 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.68■□□□□ 0.58
BRCA2P51587 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.68■□□□□ 0.58
BRCA2P51587 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.68■□□□□ 0.58
BRCA2P51587 AL021578.1-201ENST00000613646 709 ntBASIC18.68■□□□□ 0.58
BRCA2P51587 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.68■□□□□ 0.58
BRCA2P51587 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.68■□□□□ 0.58
BRCA2P51587 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BRCA2P51587 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCA2P51587 PDIA3P1-201ENST00000471856 1510 ntBASIC18.67■□□□□ 0.58
BRCA2P51587 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCA2P51587 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
BRCA2P51587 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
BRCA2P51587 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.67■□□□□ 0.58
BRCA2P51587 LINC00304-203ENST00000565008 1864 ntBASIC18.67■□□□□ 0.58
BRCA2P51587 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.67■□□□□ 0.58
BRCA2P51587 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BRCA2P51587 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCA2P51587 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCA2P51587 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCA2P51587 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCA2P51587 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.67■□□□□ 0.58
BRCA2P51587 AL589739.1-201ENST00000607720 493 ntBASIC18.67■□□□□ 0.58
BRCA2P51587 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
BRCA2P51587 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRCA2P51587 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.58
BRCA2P51587 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BRCA2P51587 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.67■□□□□ 0.58
BRCA2P51587 AC015936.2-201ENST00000593177 259 ntBASIC18.67■□□□□ 0.58
BRCA2P51587 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.67■□□□□ 0.58
BRCA2P51587 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.67■□□□□ 0.58
BRCA2P51587 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BRCA2P51587 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.66■□□□□ 0.58
BRCA2P51587 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.66■□□□□ 0.58
BRCA2P51587 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.66■□□□□ 0.58
BRCA2P51587 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
BRCA2P51587 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BRCA2P51587 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BRCA2P51587 LINC00895-201ENST00000629028 1637 ntBASIC18.66■□□□□ 0.58
BRCA2P51587 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRCA2P51587 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms