Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CPT1AP50416 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CPT1AP50416 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.64■□□□□ 0.58
CPT1AP50416 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.64■□□□□ 0.58
CPT1AP50416 AP3S2-216ENST00000617003 1561 ntBASIC18.64■□□□□ 0.58
CPT1AP50416 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.64■□□□□ 0.57
CPT1AP50416 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CPT1AP50416 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.64■□□□□ 0.57
CPT1AP50416 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.64■□□□□ 0.57
CPT1AP50416 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 AC005225.4-201ENST00000557330 545 ntBASIC18.64■□□□□ 0.57
CPT1AP50416 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 AC003101.2-201ENST00000612557 442 ntBASIC18.64■□□□□ 0.57
CPT1AP50416 AC007967.4-201ENST00000614700 386 ntBASIC18.64■□□□□ 0.57
CPT1AP50416 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.64■□□□□ 0.57
CPT1AP50416 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPT1AP50416 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CPT1AP50416 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CPT1AP50416 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CPT1AP50416 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.63■□□□□ 0.57
CPT1AP50416 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.63■□□□□ 0.57
CPT1AP50416 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.63■□□□□ 0.57
CPT1AP50416 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.63■□□□□ 0.57
CPT1AP50416 AC004890.2-204ENST00000481968 304 ntBASIC18.63■□□□□ 0.57
CPT1AP50416 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.63■□□□□ 0.57
CPT1AP50416 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.63■□□□□ 0.57
CPT1AP50416 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.63■□□□□ 0.57
CPT1AP50416 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CPT1AP50416 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CPT1AP50416 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CPT1AP50416 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.63■□□□□ 0.57
CPT1AP50416 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPT1AP50416 AC108860.2-201ENST00000562760 2183 ntBASIC18.62■□□□□ 0.57
CPT1AP50416 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CPT1AP50416 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 PRYP6-201ENST00000514804 343 ntBASIC18.62■□□□□ 0.57
CPT1AP50416 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.62■□□□□ 0.57
CPT1AP50416 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 AC100757.3-201ENST00000622361 1406 ntBASIC18.62■□□□□ 0.57
CPT1AP50416 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CPT1AP50416 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.62■□□□□ 0.57
CPT1AP50416 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.62■□□□□ 0.57
CPT1AP50416 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CPT1AP50416 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPT1AP50416 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.61■□□□□ 0.57
CPT1AP50416 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CPT1AP50416 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.61■□□□□ 0.57
CPT1AP50416 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms