Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.97□□□□□ -0.01
SOX2P48431 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SOX2P48431 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.97□□□□□ -0.01
SOX2P48431 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.97□□□□□ -0.01
SOX2P48431 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SOX2P48431 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.97□□□□□ -0.01
SOX2P48431 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.97□□□□□ -0.01
SOX2P48431 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.97□□□□□ -0.01
SOX2P48431 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 AC005336.2-201ENST00000593183 939 ntBASIC14.97□□□□□ -0.01
SOX2P48431 AL592071.1-201ENST00000611956 408 ntBASIC14.97□□□□□ -0.01
SOX2P48431 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.97□□□□□ -0.01
SOX2P48431 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.97□□□□□ -0.01
SOX2P48431 AL391256.1-201ENST00000443260 1855 ntBASIC14.97□□□□□ -0.01
SOX2P48431 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SOX2P48431 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.97□□□□□ -0.01
SOX2P48431 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SOX2P48431 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.96□□□□□ -0.01
SOX2P48431 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.96□□□□□ -0.01
SOX2P48431 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SOX2P48431 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.96□□□□□ -0.01
SOX2P48431 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.96□□□□□ -0.01
SOX2P48431 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
SOX2P48431 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SOX2P48431 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.96□□□□□ -0.01
SOX2P48431 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.96□□□□□ -0.01
SOX2P48431 AC005521.1-201ENST00000393351 872 ntBASIC14.96□□□□□ -0.01
SOX2P48431 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
SOX2P48431 AK4P3-201ENST00000418260 669 ntBASIC14.96□□□□□ -0.01
SOX2P48431 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.96□□□□□ -0.01
SOX2P48431 SPDYE13P-201ENST00000445314 798 ntBASIC14.96□□□□□ -0.01
SOX2P48431 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SOX2P48431 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.96□□□□□ -0.01
SOX2P48431 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.96□□□□□ -0.01
SOX2P48431 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.96□□□□□ -0.01
SOX2P48431 AL138831.2-201ENST00000606564 490 ntBASIC14.96□□□□□ -0.01
SOX2P48431 AC009336.1-201ENST00000608941 1553 ntBASIC14.96□□□□□ -0.01
SOX2P48431 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.96□□□□□ -0.01
SOX2P48431 AL645728.1-201ENST00000366221 2101 ntBASIC14.96□□□□□ -0.01
SOX2P48431 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SOX2P48431 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SOX2P48431 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SOX2P48431 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
SOX2P48431 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SOX2P48431 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SOX2P48431 ALOX12P2-203ENST00000570921 1945 ntBASIC14.96□□□□□ -0.02
SOX2P48431 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SOX2P48431 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.96□□□□□ -0.02
SOX2P48431 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
SOX2P48431 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SOX2P48431 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.95□□□□□ -0.02
SOX2P48431 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.95□□□□□ -0.02
SOX2P48431 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SOX2P48431 AL513523.2-202ENST00000427283 2040 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms