Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF4P48230 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.05■□□□□ 0.64
TM4SF4P48230 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF4P48230 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
TM4SF4P48230 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TM4SF4P48230 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF4P48230 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.05■□□□□ 0.64
TM4SF4P48230 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.05■□□□□ 0.64
TM4SF4P48230 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.05■□□□□ 0.64
TM4SF4P48230 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.05■□□□□ 0.64
TM4SF4P48230 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.05■□□□□ 0.64
TM4SF4P48230 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF4P48230 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TM4SF4P48230 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
TM4SF4P48230 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
TM4SF4P48230 AC093525.8-201ENST00000624099 1342 ntBASIC19.04■□□□□ 0.64
TM4SF4P48230 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF4P48230 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TM4SF4P48230 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF4P48230 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF4P48230 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF4P48230 USP32P1-208ENST00000506594 1164 ntBASIC19.04■□□□□ 0.64
TM4SF4P48230 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.04■□□□□ 0.64
TM4SF4P48230 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF4P48230 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF4P48230 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF4P48230 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF4P48230 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF4P48230 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF4P48230 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF4P48230 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 NOC2LP1-202ENST00000452600 2235 ntBASIC19.03■□□□□ 0.64
TM4SF4P48230 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.03■□□□□ 0.64
TM4SF4P48230 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF4P48230 AL355994.2-201ENST00000447882 704 ntBASIC19.03■□□□□ 0.64
TM4SF4P48230 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF4P48230 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF4P48230 AC092337.1-201ENST00000568699 1129 ntBASIC19.03■□□□□ 0.64
TM4SF4P48230 AC010319.3-201ENST00000597028 470 ntBASIC19.03■□□□□ 0.64
TM4SF4P48230 AC244093.1-201ENST00000610837 814 ntBASIC19.03■□□□□ 0.64
TM4SF4P48230 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.03■□□□□ 0.64
TM4SF4P48230 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF4P48230 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF4P48230 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.03■□□□□ 0.64
TM4SF4P48230 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
TM4SF4P48230 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.03■□□□□ 0.64
TM4SF4P48230 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF4P48230 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.02■□□□□ 0.64
TM4SF4P48230 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TM4SF4P48230 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.02■□□□□ 0.64
TM4SF4P48230 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
TM4SF4P48230 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF4P48230 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TM4SF4P48230 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF4P48230 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TM4SF4P48230 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF4P48230 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.02■□□□□ 0.64
TM4SF4P48230 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TM4SF4P48230 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms