Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SSR1P43307 EGFEM1P-202ENST00000431685 1563 ntBASIC18.09■□□□□ 0.49
SSR1P43307 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.09■□□□□ 0.49
SSR1P43307 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.09■□□□□ 0.49
SSR1P43307 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.09■□□□□ 0.49
SSR1P43307 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 POM121L3P-201ENST00000419331 1163 ntBASIC18.09■□□□□ 0.49
SSR1P43307 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.09■□□□□ 0.49
SSR1P43307 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.09■□□□□ 0.49
SSR1P43307 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.09■□□□□ 0.49
SSR1P43307 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 AC018695.7-201ENST00000624587 2492 ntBASIC18.09■□□□□ 0.49
SSR1P43307 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.09■□□□□ 0.49
SSR1P43307 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
SSR1P43307 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SSR1P43307 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.08■□□□□ 0.49
SSR1P43307 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SSR1P43307 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SSR1P43307 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SSR1P43307 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.08■□□□□ 0.49
SSR1P43307 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.08■□□□□ 0.48
SSR1P43307 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSR1P43307 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSR1P43307 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.08■□□□□ 0.48
SSR1P43307 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.08■□□□□ 0.48
SSR1P43307 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.08■□□□□ 0.48
SSR1P43307 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SSR1P43307 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.08■□□□□ 0.48
SSR1P43307 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.08■□□□□ 0.48
SSR1P43307 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSR1P43307 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SSR1P43307 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.08■□□□□ 0.48
SSR1P43307 AC126755.1-201ENST00000525846 6405 ntBASIC18.08■□□□□ 0.48
SSR1P43307 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.08■□□□□ 0.48
SSR1P43307 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.08■□□□□ 0.48
SSR1P43307 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.08■□□□□ 0.48
SSR1P43307 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SSR1P43307 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SSR1P43307 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.07■□□□□ 0.48
SSR1P43307 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
SSR1P43307 UBALD1-205ENST00000590891 2641 ntBASIC18.07■□□□□ 0.48
SSR1P43307 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.07■□□□□ 0.48
SSR1P43307 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SSR1P43307 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SSR1P43307 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.07■□□□□ 0.48
SSR1P43307 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 SIGLEC30P-201ENST00000455569 941 ntBASIC18.07■□□□□ 0.48
SSR1P43307 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.07■□□□□ 0.48
SSR1P43307 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.07■□□□□ 0.48
SSR1P43307 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.07■□□□□ 0.48
SSR1P43307 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.07■□□□□ 0.48
SSR1P43307 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.07■□□□□ 0.48
SSR1P43307 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SSR1P43307 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SSR1P43307 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms