Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RFC5P40937 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 RNU1-129P-201ENST00000384064 167 ntBASIC18.64■□□□□ 0.57
RFC5P40937 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC5P40937 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RFC5P40937 MIR3909-201ENST00000579518 119 ntBASIC18.64■□□□□ 0.57
RFC5P40937 U1.21-201ENST00000580816 167 ntBASIC18.64■□□□□ 0.57
RFC5P40937 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFC5P40937 CYP2A7P1-201ENST00000595391 815 ntBASIC18.64■□□□□ 0.57
RFC5P40937 AL009183.1-201ENST00000603760 355 ntBASIC18.64■□□□□ 0.57
RFC5P40937 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RFC5P40937 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RFC5P40937 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.64■□□□□ 0.57
RFC5P40937 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RFC5P40937 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC5P40937 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC5P40937 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC5P40937 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RFC5P40937 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC5P40937 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.63■□□□□ 0.57
RFC5P40937 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RFC5P40937 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RFC5P40937 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RFC5P40937 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 AC092068.3-201ENST00000587894 2016 ntBASIC18.63■□□□□ 0.57
RFC5P40937 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 AC254562.1-201ENST00000417586 456 ntBASIC18.63■□□□□ 0.57
RFC5P40937 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.63■□□□□ 0.57
RFC5P40937 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.63■□□□□ 0.57
RFC5P40937 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RFC5P40937 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.63■□□□□ 0.57
RFC5P40937 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.63■□□□□ 0.57
RFC5P40937 AP001160.2-201ENST00000596071 487 ntBASIC18.63■□□□□ 0.57
RFC5P40937 AC013467.2-201ENST00000605472 835 ntBASIC18.63■□□□□ 0.57
RFC5P40937 AC099522.2-201ENST00000607001 744 ntBASIC18.63■□□□□ 0.57
RFC5P40937 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.63■□□□□ 0.57
RFC5P40937 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RFC5P40937 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.63■□□□□ 0.57
RFC5P40937 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.63■□□□□ 0.57
RFC5P40937 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.63■□□□□ 0.57
RFC5P40937 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RFC5P40937 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
RFC5P40937 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.63■□□□□ 0.57
RFC5P40937 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
RFC5P40937 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC5P40937 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RFC5P40937 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RFC5P40937 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFC5P40937 PMS2P4-201ENST00000412466 1052 ntBASIC18.62■□□□□ 0.57
RFC5P40937 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
RFC5P40937 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.62■□□□□ 0.57
RFC5P40937 RPS8P6-201ENST00000426177 609 ntBASIC18.62■□□□□ 0.57
RFC5P40937 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.62■□□□□ 0.57
RFC5P40937 DNAJB3-202ENST00000449667 1266 ntBASIC18.62■□□□□ 0.57
RFC5P40937 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.62■□□□□ 0.57
RFC5P40937 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.62■□□□□ 0.57
RFC5P40937 AP002490.2-201ENST00000524791 560 ntBASIC18.62■□□□□ 0.57
RFC5P40937 AL031055.1-201ENST00000606362 631 ntBASIC18.62■□□□□ 0.57
RFC5P40937 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFC5P40937 AL161645.1-201ENST00000622716 1255 ntBASIC18.62■□□□□ 0.57
RFC5P40937 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC5P40937 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms