Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COPB2P35606 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.3■□□□□ 0.68
COPB2P35606 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
COPB2P35606 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.3■□□□□ 0.68
COPB2P35606 BASP1P1-201ENST00000430708 665 ntBASIC19.3■□□□□ 0.68
COPB2P35606 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.3■□□□□ 0.68
COPB2P35606 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.3■□□□□ 0.68
COPB2P35606 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.3■□□□□ 0.68
COPB2P35606 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COPB2P35606 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
COPB2P35606 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COPB2P35606 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.3■□□□□ 0.68
COPB2P35606 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.3■□□□□ 0.68
COPB2P35606 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.3■□□□□ 0.68
COPB2P35606 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.3■□□□□ 0.68
COPB2P35606 AC093525.9-201ENST00000624961 1746 ntBASIC19.3■□□□□ 0.68
COPB2P35606 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
COPB2P35606 SLC22A20-204ENST00000530038 1673 ntBASIC19.3■□□□□ 0.68
COPB2P35606 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COPB2P35606 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.29■□□□□ 0.68
COPB2P35606 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.29■□□□□ 0.68
COPB2P35606 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
COPB2P35606 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 AL035633.1-201ENST00000406139 838 ntBASIC19.29■□□□□ 0.68
COPB2P35606 AC107890.1-201ENST00000422478 521 ntBASIC19.29■□□□□ 0.68
COPB2P35606 AC055876.3-201ENST00000431496 288 ntBASIC19.29■□□□□ 0.68
COPB2P35606 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.29■□□□□ 0.68
COPB2P35606 AC093214.1-201ENST00000511688 1107 ntBASIC19.29■□□□□ 0.68
COPB2P35606 DUX4L27-201ENST00000554796 1261 ntBASIC19.29■□□□□ 0.68
COPB2P35606 AC026150.2-201ENST00000564693 1156 ntBASIC19.29■□□□□ 0.68
COPB2P35606 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.29■□□□□ 0.68
COPB2P35606 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.29■□□□□ 0.68
COPB2P35606 MPDU1-223ENST00000582151 728 ntBASIC19.29■□□□□ 0.68
COPB2P35606 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.29■□□□□ 0.68
COPB2P35606 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COPB2P35606 AC138649.4-201ENST00000612222 287 ntBASIC19.29■□□□□ 0.68
COPB2P35606 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.29■□□□□ 0.68
COPB2P35606 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
COPB2P35606 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COPB2P35606 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COPB2P35606 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 LINC00896-202ENST00000609602 2128 ntBASIC19.28■□□□□ 0.68
COPB2P35606 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.28■□□□□ 0.68
COPB2P35606 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.28■□□□□ 0.68
COPB2P35606 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COPB2P35606 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.28■□□□□ 0.68
COPB2P35606 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.28■□□□□ 0.68
COPB2P35606 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COPB2P35606 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.28■□□□□ 0.68
COPB2P35606 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.28■□□□□ 0.68
COPB2P35606 AC125807.1-201ENST00000483097 614 ntBASIC19.28■□□□□ 0.68
COPB2P35606 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.28■□□□□ 0.68
COPB2P35606 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.28■□□□□ 0.68
COPB2P35606 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.28■□□□□ 0.68
COPB2P35606 AC140878.1-201ENST00000565277 250 ntBASIC19.28■□□□□ 0.68
COPB2P35606 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.28■□□□□ 0.68
COPB2P35606 MIR4745-201ENST00000577608 62 ntBASIC19.28■□□□□ 0.68
COPB2P35606 AL390955.2-201ENST00000603032 514 ntBASIC19.28■□□□□ 0.68
COPB2P35606 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.28■□□□□ 0.68
COPB2P35606 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
COPB2P35606 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
COPB2P35606 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.28■□□□□ 0.68
COPB2P35606 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.28■□□□□ 0.68
COPB2P35606 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPB2P35606 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms