Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.53□□□□□ -0.4
CKS2P33552 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CKS2P33552 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CKS2P33552 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CKS2P33552 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.52□□□□□ -0.4
CKS2P33552 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CKS2P33552 AP002414.2-201ENST00000591780 3365 ntBASIC12.52□□□□□ -0.4
CKS2P33552 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
CKS2P33552 AC104640.1-201ENST00000562617 2109 ntBASIC12.52□□□□□ -0.4
CKS2P33552 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CKS2P33552 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CKS2P33552 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CKS2P33552 MYCLP1-201ENST00000372451 1075 ntBASIC12.52□□□□□ -0.41
CKS2P33552 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.52□□□□□ -0.41
CKS2P33552 AC112698.1-201ENST00000510299 916 ntBASIC12.52□□□□□ -0.41
CKS2P33552 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.52□□□□□ -0.41
CKS2P33552 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.52□□□□□ -0.41
CKS2P33552 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CKS2P33552 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CKS2P33552 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CKS2P33552 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CKS2P33552 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CKS2P33552 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CKS2P33552 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
CKS2P33552 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.52□□□□□ -0.41
CKS2P33552 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CKS2P33552 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CKS2P33552 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CKS2P33552 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.52□□□□□ -0.41
CKS2P33552 AL135905.2-201ENST00000584934 1404 ntBASIC12.52□□□□□ -0.41
CKS2P33552 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.52□□□□□ -0.41
CKS2P33552 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.52□□□□□ -0.41
CKS2P33552 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CKS2P33552 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.52□□□□□ -0.41
CKS2P33552 AC006538.1-201ENST00000567905 1585 ntBASIC12.52□□□□□ -0.41
CKS2P33552 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CKS2P33552 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CKS2P33552 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CKS2P33552 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CKS2P33552 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.51□□□□□ -0.41
CKS2P33552 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CKS2P33552 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
CKS2P33552 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 HIST1H2APS4-201ENST00000362070 348 ntBASIC12.51□□□□□ -0.41
CKS2P33552 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.51□□□□□ -0.41
CKS2P33552 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CKS2P33552 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CKS2P33552 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.51□□□□□ -0.41
CKS2P33552 MIR3917-201ENST00000580971 93 ntBASIC12.51□□□□□ -0.41
CKS2P33552 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CKS2P33552 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.51□□□□□ -0.41
CKS2P33552 AC073648.6-201ENST00000641589 218 ntBASIC12.51□□□□□ -0.41
CKS2P33552 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CKS2P33552 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CKS2P33552 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
CKS2P33552 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.51□□□□□ -0.41
CKS2P33552 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.51□□□□□ -0.41
CKS2P33552 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CKS2P33552 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.51□□□□□ -0.41
CKS2P33552 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.51□□□□□ -0.41
CKS2P33552 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.51□□□□□ -0.41
CKS2P33552 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CKS2P33552 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CKS2P33552 AL391256.1-201ENST00000443260 1855 ntBASIC12.51□□□□□ -0.41
CKS2P33552 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 ALOX12P2-203ENST00000570921 1945 ntBASIC12.5□□□□□ -0.41
CKS2P33552 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CKS2P33552 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CKS2P33552 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CKS2P33552 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CKS2P33552 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.5□□□□□ -0.41
CKS2P33552 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CKS2P33552 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms