Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF1P30408 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF1P30408 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF1P30408 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.81■□□□□ 0.92
TM4SF1P30408 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.81■□□□□ 0.92
TM4SF1P30408 AC008494.3-201ENST00000606615 944 ntBASIC20.81■□□□□ 0.92
TM4SF1P30408 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
TM4SF1P30408 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF1P30408 AL023806.1-201ENST00000603994 1649 ntBASIC20.81■□□□□ 0.92
TM4SF1P30408 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF1P30408 AC108860.2-201ENST00000562760 2183 ntBASIC20.8■□□□□ 0.92
TM4SF1P30408 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.8■□□□□ 0.92
TM4SF1P30408 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.8■□□□□ 0.92
TM4SF1P30408 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 SPDYE19P-201ENST00000338590 713 ntBASIC20.8■□□□□ 0.92
TM4SF1P30408 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.8■□□□□ 0.92
TM4SF1P30408 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.8■□□□□ 0.92
TM4SF1P30408 DOC2GP-202ENST00000514950 1163 ntBASIC20.8■□□□□ 0.92
TM4SF1P30408 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.8■□□□□ 0.92
TM4SF1P30408 AL512361.1-201ENST00000554200 418 ntBASIC20.8■□□□□ 0.92
TM4SF1P30408 WASH4P-201ENST00000564273 1246 ntBASIC20.8■□□□□ 0.92
TM4SF1P30408 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.8■□□□□ 0.92
TM4SF1P30408 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.8■□□□□ 0.92
TM4SF1P30408 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.8■□□□□ 0.92
TM4SF1P30408 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF1P30408 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.8■□□□□ 0.92
TM4SF1P30408 AC116353.5-201ENST00000638148 1699 ntBASIC20.8■□□□□ 0.92
TM4SF1P30408 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF1P30408 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF1P30408 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF1P30408 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TM4SF1P30408 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.79■□□□□ 0.92
TM4SF1P30408 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF1P30408 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.79■□□□□ 0.92
TM4SF1P30408 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.79■□□□□ 0.92
TM4SF1P30408 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.79■□□□□ 0.92
TM4SF1P30408 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
TM4SF1P30408 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.79■□□□□ 0.92
TM4SF1P30408 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF1P30408 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.79■□□□□ 0.92
TM4SF1P30408 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
TM4SF1P30408 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TM4SF1P30408 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF1P30408 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TM4SF1P30408 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF1P30408 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TM4SF1P30408 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TM4SF1P30408 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.78■□□□□ 0.92
TM4SF1P30408 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.78■□□□□ 0.92
TM4SF1P30408 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.78■□□□□ 0.92
TM4SF1P30408 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 AC008764.6-201ENST00000595909 2069 ntBASIC20.78■□□□□ 0.92
TM4SF1P30408 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TM4SF1P30408 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.78■□□□□ 0.92
TM4SF1P30408 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.78■□□□□ 0.92
TM4SF1P30408 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
TM4SF1P30408 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TM4SF1P30408 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 SPDYE18-201ENST00000510091 1050 ntBASIC20.78■□□□□ 0.92
TM4SF1P30408 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TM4SF1P30408 KRT17P8-201ENST00000540749 863 ntBASIC20.78■□□□□ 0.92
TM4SF1P30408 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.78■□□□□ 0.92
TM4SF1P30408 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TM4SF1P30408 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.78■□□□□ 0.92
TM4SF1P30408 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TM4SF1P30408 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF1P30408 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TM4SF1P30408 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.78■□□□□ 0.92
TM4SF1P30408 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.77■□□□□ 0.92
TM4SF1P30408 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF1P30408 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.77■□□□□ 0.92
TM4SF1P30408 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms