Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 AC005521.1-201ENST00000393351 872 ntBASIC16.54■□□□□ 0.24
EPHA3P29320 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 KLF4P1-201ENST00000412782 1185 ntBASIC16.54■□□□□ 0.24
EPHA3P29320 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA3P29320 AK4P3-201ENST00000418260 669 ntBASIC16.54■□□□□ 0.24
EPHA3P29320 AL645929.1-201ENST00000420084 975 ntBASIC16.54■□□□□ 0.24
EPHA3P29320 KRT18P57-201ENST00000443599 1254 ntBASIC16.54■□□□□ 0.24
EPHA3P29320 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 AC092647.4-201ENST00000457211 535 ntBASIC16.54■□□□□ 0.24
EPHA3P29320 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.54■□□□□ 0.24
EPHA3P29320 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.54■□□□□ 0.24
EPHA3P29320 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHA3P29320 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.54■□□□□ 0.24
EPHA3P29320 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHA3P29320 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.54■□□□□ 0.24
EPHA3P29320 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHA3P29320 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.54■□□□□ 0.24
EPHA3P29320 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA3P29320 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
EPHA3P29320 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.54■□□□□ 0.24
EPHA3P29320 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
EPHA3P29320 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.54■□□□□ 0.24
EPHA3P29320 MST1L-201ENST00000442552 2185 ntBASIC16.54■□□□□ 0.24
EPHA3P29320 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
EPHA3P29320 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
EPHA3P29320 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
EPHA3P29320 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.53■□□□□ 0.24
EPHA3P29320 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.53■□□□□ 0.24
EPHA3P29320 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.53■□□□□ 0.24
EPHA3P29320 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.53■□□□□ 0.24
EPHA3P29320 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
EPHA3P29320 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.53■□□□□ 0.24
EPHA3P29320 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.53■□□□□ 0.24
EPHA3P29320 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.53■□□□□ 0.24
EPHA3P29320 AC093827.2-201ENST00000512654 315 ntBASIC16.53■□□□□ 0.24
EPHA3P29320 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.53■□□□□ 0.24
EPHA3P29320 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
EPHA3P29320 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.53■□□□□ 0.24
EPHA3P29320 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
EPHA3P29320 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
EPHA3P29320 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 AC024909.3-201ENST00000611513 2257 ntBASIC16.53■□□□□ 0.24
EPHA3P29320 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
EPHA3P29320 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
EPHA3P29320 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
EPHA3P29320 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 AL365203.3-201ENST00000609742 2057 ntBASIC16.52■□□□□ 0.24
EPHA3P29320 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.52■□□□□ 0.24
EPHA3P29320 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
EPHA3P29320 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
EPHA3P29320 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
EPHA3P29320 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.52■□□□□ 0.24
EPHA3P29320 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
EPHA3P29320 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
EPHA3P29320 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.52■□□□□ 0.24
EPHA3P29320 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.52■□□□□ 0.24
EPHA3P29320 IGHV3-41-201ENST00000613121 348 ntBASIC16.52■□□□□ 0.24
EPHA3P29320 AD001527.2-201ENST00000622994 785 ntBASIC16.52■□□□□ 0.24
EPHA3P29320 AC097493.4-201ENST00000641197 219 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms