Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.28■□□□□ 0.36
PTPN3P26045 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.28■□□□□ 0.36
PTPN3P26045 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PTPN3P26045 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.28■□□□□ 0.36
PTPN3P26045 AP002469.2-201ENST00000531724 424 ntBASIC17.28■□□□□ 0.36
PTPN3P26045 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 AC105339.3-201ENST00000560043 636 ntBASIC17.28■□□□□ 0.36
PTPN3P26045 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.28■□□□□ 0.36
PTPN3P26045 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.28■□□□□ 0.36
PTPN3P26045 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 AP002414.3-201ENST00000589352 1468 ntBASIC17.28■□□□□ 0.36
PTPN3P26045 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 HLA-A-202ENST00000376806 1854 ntBASIC17.28■□□□□ 0.36
PTPN3P26045 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTPN3P26045 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
PTPN3P26045 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN3P26045 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN3P26045 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PTPN3P26045 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN3P26045 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN3P26045 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN3P26045 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PTPN3P26045 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 UBALD1-205ENST00000590891 2641 ntBASIC17.27■□□□□ 0.36
PTPN3P26045 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN3P26045 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN3P26045 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN3P26045 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.27■□□□□ 0.36
PTPN3P26045 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN3P26045 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.27■□□□□ 0.36
PTPN3P26045 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN3P26045 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 AL356488.2-201ENST00000602755 427 ntBASIC17.27■□□□□ 0.36
PTPN3P26045 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN3P26045 FAM215A-202ENST00000632077 792 ntBASIC17.27■□□□□ 0.36
PTPN3P26045 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN3P26045 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN3P26045 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN3P26045 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN3P26045 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN3P26045 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN3P26045 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTPN3P26045 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PTPN3P26045 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN3P26045 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.27■□□□□ 0.35
PTPN3P26045 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN3P26045 AC006277.1-201ENST00000624348 1610 ntBASIC17.26■□□□□ 0.35
PTPN3P26045 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PTPN3P26045 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTPN3P26045 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN3P26045 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.26■□□□□ 0.35
PTPN3P26045 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PTPN3P26045 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN3P26045 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTPN3P26045 AC008667.4-201ENST00000607370 168 ntBASIC17.26■□□□□ 0.35
PTPN3P26045 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.26■□□□□ 0.35
PTPN3P26045 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTPN3P26045 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms