Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.9■□□□□ 0.14
CHMP24386 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP24386 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 AL353593.2-201ENST00000602529 1483 ntBASIC15.9■□□□□ 0.14
CHMP24386 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP24386 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.9■□□□□ 0.14
CHMP24386 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.9■□□□□ 0.14
CHMP24386 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CHMP24386 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CHMP24386 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.89■□□□□ 0.13
CHMP24386 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP24386 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CHMP24386 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.89■□□□□ 0.13
CHMP24386 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CHMP24386 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.89■□□□□ 0.13
CHMP24386 AC002558.1-201ENST00000488906 803 ntBASIC15.89■□□□□ 0.13
CHMP24386 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP24386 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.89■□□□□ 0.13
CHMP24386 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.89■□□□□ 0.13
CHMP24386 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.89■□□□□ 0.13
CHMP24386 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.89■□□□□ 0.13
CHMP24386 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP24386 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.89■□□□□ 0.13
CHMP24386 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CHMP24386 AL139288.1-201ENST00000623748 933 ntBASIC15.89■□□□□ 0.13
CHMP24386 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.89■□□□□ 0.13
CHMP24386 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.89■□□□□ 0.13
CHMP24386 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
CHMP24386 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CHMP24386 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 AL049757.1-201ENST00000616842 1596 ntBASIC15.88■□□□□ 0.13
CHMP24386 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CHMP24386 FAM197Y8-203ENST00000450145 560 ntBASIC15.88■□□□□ 0.13
CHMP24386 IGHV3-52-201ENST00000519770 353 ntBASIC15.88■□□□□ 0.13
CHMP24386 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.88■□□□□ 0.13
CHMP24386 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.88■□□□□ 0.13
CHMP24386 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CHMP24386 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.88■□□□□ 0.13
CHMP24386 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CHMP24386 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.88■□□□□ 0.13
CHMP24386 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.88■□□□□ 0.13
CHMP24386 LINC02199-201ENST00000506655 2702 ntBASIC15.88■□□□□ 0.13
CHMP24386 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CHMP24386 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.87■□□□□ 0.13
CHMP24386 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.87■□□□□ 0.13
CHMP24386 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CHMP24386 AC092068.3-201ENST00000587894 2016 ntBASIC15.87■□□□□ 0.13
CHMP24386 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.87■□□□□ 0.13
CHMP24386 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHMP24386 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.87■□□□□ 0.13
CHMP24386 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms