Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
VAMP1P23763 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VAMP1P23763 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VAMP1P23763 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.36□□□□□ -0.11
VAMP1P23763 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VAMP1P23763 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.36□□□□□ -0.11
VAMP1P23763 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 PCDHA3-202ENST00000532566 4594 ntBASIC14.36□□□□□ -0.11
VAMP1P23763 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VAMP1P23763 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.36□□□□□ -0.11
VAMP1P23763 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VAMP1P23763 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
VAMP1P23763 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.35□□□□□ -0.11
VAMP1P23763 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.35□□□□□ -0.11
VAMP1P23763 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.35□□□□□ -0.11
VAMP1P23763 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.35□□□□□ -0.11
VAMP1P23763 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.35□□□□□ -0.11
VAMP1P23763 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VAMP1P23763 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
VAMP1P23763 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.35□□□□□ -0.11
VAMP1P23763 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.35□□□□□ -0.11
VAMP1P23763 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.35□□□□□ -0.11
VAMP1P23763 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.35□□□□□ -0.11
VAMP1P23763 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
VAMP1P23763 AC120057.1-201ENST00000483947 663 ntBASIC14.35□□□□□ -0.11
VAMP1P23763 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VAMP1P23763 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.35□□□□□ -0.11
VAMP1P23763 AC009154.2-201ENST00000621177 724 ntBASIC14.35□□□□□ -0.11
VAMP1P23763 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.35□□□□□ -0.11
VAMP1P23763 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.35□□□□□ -0.11
VAMP1P23763 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.35□□□□□ -0.11
VAMP1P23763 ALOX12P2-203ENST00000570921 1945 ntBASIC14.35□□□□□ -0.11
VAMP1P23763 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VAMP1P23763 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 OR2I1P-210ENST00000642037 4691 ntBASIC14.34□□□□□ -0.11
VAMP1P23763 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 AC144831.1-201ENST00000573312 2656 ntBASIC14.34□□□□□ -0.11
VAMP1P23763 OR2I1P-209ENST00000641730 5365 ntBASIC14.34□□□□□ -0.11
VAMP1P23763 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.34□□□□□ -0.11
VAMP1P23763 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
VAMP1P23763 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VAMP1P23763 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.34□□□□□ -0.11
VAMP1P23763 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms