Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.51■□□□□ 0.87
KCNA3P22001 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KCNA3P22001 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNA3P22001 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KCNA3P22001 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KCNA3P22001 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNA3P22001 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
KCNA3P22001 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KCNA3P22001 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.5■□□□□ 0.87
KCNA3P22001 AL589987.1-201ENST00000453380 819 ntBASIC20.5■□□□□ 0.87
KCNA3P22001 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.5■□□□□ 0.87
KCNA3P22001 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.5■□□□□ 0.87
KCNA3P22001 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.5■□□□□ 0.87
KCNA3P22001 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.5■□□□□ 0.87
KCNA3P22001 AC004461.2-201ENST00000629517 803 ntBASIC20.5■□□□□ 0.87
KCNA3P22001 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
KCNA3P22001 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
KCNA3P22001 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
KCNA3P22001 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KCNA3P22001 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
KCNA3P22001 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNA3P22001 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.49■□□□□ 0.87
KCNA3P22001 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KCNA3P22001 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
KCNA3P22001 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
KCNA3P22001 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNA3P22001 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNA3P22001 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNA3P22001 MIR1908-201ENST00000410394 80 ntBASIC20.49■□□□□ 0.87
KCNA3P22001 AC004945.1-201ENST00000416738 983 ntBASIC20.49■□□□□ 0.87
KCNA3P22001 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNA3P22001 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNA3P22001 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.49■□□□□ 0.87
KCNA3P22001 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KCNA3P22001 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNA3P22001 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNA3P22001 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.49■□□□□ 0.87
KCNA3P22001 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNA3P22001 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 MIR6869-201ENST00000619434 62 ntBASIC20.49■□□□□ 0.87
KCNA3P22001 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.49■□□□□ 0.87
KCNA3P22001 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
KCNA3P22001 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KCNA3P22001 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNA3P22001 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNA3P22001 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNA3P22001 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNA3P22001 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNA3P22001 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KCNA3P22001 KRT8P49-201ENST00000604166 1432 ntBASIC20.48■□□□□ 0.87
KCNA3P22001 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.48■□□□□ 0.87
KCNA3P22001 SLC25A1P3-201ENST00000395415 828 ntBASIC20.48■□□□□ 0.87
KCNA3P22001 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KCNA3P22001 AC234783.1-201ENST00000441761 496 ntBASIC20.48■□□□□ 0.87
KCNA3P22001 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.48■□□□□ 0.87
KCNA3P22001 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNA3P22001 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.48■□□□□ 0.87
KCNA3P22001 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.48■□□□□ 0.87
KCNA3P22001 AC123567.1-201ENST00000548294 1261 ntBASIC20.48■□□□□ 0.87
KCNA3P22001 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KCNA3P22001 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.48■□□□□ 0.87
KCNA3P22001 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
KCNA3P22001 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNA3P22001 WFDC1-204ENST00000613603 549 ntBASIC20.48■□□□□ 0.87
KCNA3P22001 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNA3P22001 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNA3P22001 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.48■□□□□ 0.87
KCNA3P22001 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.48■□□□□ 0.87
KCNA3P22001 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
KCNA3P22001 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms