Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPRAP18433 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPRAP18433 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 AC009407.1-201ENST00000568958 598 ntBASIC19.42■□□□□ 0.7
PTPRAP18433 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.42■□□□□ 0.7
PTPRAP18433 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTPRAP18433 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPRAP18433 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 AC073439.1-201ENST00000624121 1774 ntBASIC19.42■□□□□ 0.7
PTPRAP18433 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.41■□□□□ 0.7
PTPRAP18433 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PTPRAP18433 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 FAM220BP-201ENST00000377689 816 ntBASIC19.41■□□□□ 0.7
PTPRAP18433 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 COX5BP8-201ENST00000416911 349 ntBASIC19.41■□□□□ 0.7
PTPRAP18433 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRAP18433 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 RN7SL692P-201ENST00000464677 288 ntBASIC19.41■□□□□ 0.7
PTPRAP18433 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRAP18433 MEIS3P1-201ENST00000495167 958 ntBASIC19.41■□□□□ 0.7
PTPRAP18433 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.41■□□□□ 0.7
PTPRAP18433 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRAP18433 TEX28P1-201ENST00000613479 1221 ntBASIC19.41■□□□□ 0.7
PTPRAP18433 SPTSSB-204ENST00000617024 1292 ntBASIC19.41■□□□□ 0.7
PTPRAP18433 TEX28P2-201ENST00000617764 1221 ntBASIC19.41■□□□□ 0.7
PTPRAP18433 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PTPRAP18433 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PTPRAP18433 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.41■□□□□ 0.7
PTPRAP18433 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTPRAP18433 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTPRAP18433 NOC2LP1-202ENST00000452600 2235 ntBASIC19.4■□□□□ 0.7
PTPRAP18433 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.4■□□□□ 0.7
PTPRAP18433 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PTPRAP18433 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 AL353705.2-201ENST00000428243 662 ntBASIC19.4■□□□□ 0.7
PTPRAP18433 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRAP18433 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRAP18433 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRAP18433 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRAP18433 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRAP18433 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.4■□□□□ 0.7
PTPRAP18433 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRAP18433 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPRAP18433 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRAP18433 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRAP18433 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
PTPRAP18433 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PTPRAP18433 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 AC134043.2-201ENST00000624206 2238 ntBASIC19.4■□□□□ 0.7
PTPRAP18433 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTPRAP18433 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPRAP18433 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPRAP18433 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms