Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CCL4P13236 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCL4P13236 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL4P13236 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL4P13236 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.9■□□□□ 0.14
CCL4P13236 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.9■□□□□ 0.14
CCL4P13236 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL4P13236 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.9■□□□□ 0.14
CCL4P13236 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL4P13236 LINC02560-201ENST00000596379 459 ntBASIC15.9■□□□□ 0.14
CCL4P13236 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.9■□□□□ 0.14
CCL4P13236 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.9■□□□□ 0.14
CCL4P13236 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL4P13236 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCL4P13236 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CCL4P13236 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCL4P13236 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCL4P13236 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCL4P13236 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.9■□□□□ 0.14
CCL4P13236 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL4P13236 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL4P13236 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCL4P13236 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CCL4P13236 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCL4P13236 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL4P13236 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 AL138688.1-201ENST00000624851 1594 ntBASIC15.89■□□□□ 0.13
CCL4P13236 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.89■□□□□ 0.13
CCL4P13236 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.89■□□□□ 0.13
CCL4P13236 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCL4P13236 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL4P13236 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.89■□□□□ 0.13
CCL4P13236 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCL4P13236 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.89■□□□□ 0.13
CCL4P13236 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.89■□□□□ 0.13
CCL4P13236 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.89■□□□□ 0.13
CCL4P13236 MIR4492-201ENST00000581627 80 ntBASIC15.89■□□□□ 0.13
CCL4P13236 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.89■□□□□ 0.13
CCL4P13236 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.89■□□□□ 0.13
CCL4P13236 AC008761.3-201ENST00000624803 892 ntBASIC15.89■□□□□ 0.13
CCL4P13236 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CCL4P13236 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCL4P13236 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL4P13236 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CCL4P13236 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL4P13236 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CCL4P13236 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.88■□□□□ 0.13
CCL4P13236 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.88■□□□□ 0.13
CCL4P13236 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.88■□□□□ 0.13
CCL4P13236 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.88■□□□□ 0.13
CCL4P13236 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCL4P13236 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CCL4P13236 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCL4P13236 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.88■□□□□ 0.13
CCL4P13236 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.88■□□□□ 0.13
CCL4P13236 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCL4P13236 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.88■□□□□ 0.13
CCL4P13236 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.88■□□□□ 0.13
CCL4P13236 AC021097.1-201ENST00000607902 574 ntBASIC15.88■□□□□ 0.13
CCL4P13236 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.88■□□□□ 0.13
CCL4P13236 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCL4P13236 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms