Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 NKAPP1-205ENST00000585790 367 ntBASIC17.03■□□□□ 0.32
APOA4P06727 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
APOA4P06727 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.03■□□□□ 0.32
APOA4P06727 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APOA4P06727 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.02■□□□□ 0.32
APOA4P06727 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.02■□□□□ 0.32
APOA4P06727 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.02■□□□□ 0.32
APOA4P06727 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
APOA4P06727 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
APOA4P06727 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.02■□□□□ 0.32
APOA4P06727 AL450487.1-201ENST00000426799 995 ntBASIC17.02■□□□□ 0.32
APOA4P06727 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.02■□□□□ 0.32
APOA4P06727 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.02■□□□□ 0.32
APOA4P06727 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.02■□□□□ 0.32
APOA4P06727 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APOA4P06727 AL691432.3-201ENST00000621860 400 ntBASIC17.02■□□□□ 0.32
APOA4P06727 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.02■□□□□ 0.31
APOA4P06727 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOA4P06727 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOA4P06727 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.02■□□□□ 0.31
APOA4P06727 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
APOA4P06727 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOA4P06727 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOA4P06727 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
APOA4P06727 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APOA4P06727 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
APOA4P06727 FRMD8P1-201ENST00000440433 1524 ntBASIC17.01■□□□□ 0.31
APOA4P06727 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
APOA4P06727 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 TUBB8P12-201ENST00000308911 1335 ntBASIC17.01■□□□□ 0.31
APOA4P06727 TUBB7P-202ENST00000428444 1305 ntBASIC17.01■□□□□ 0.31
APOA4P06727 TUBB8P7-204ENST00000567960 1332 ntBASIC17.01■□□□□ 0.31
APOA4P06727 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 AC097637.2-201ENST00000624096 1997 ntBASIC17.01■□□□□ 0.31
APOA4P06727 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APOA4P06727 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.01■□□□□ 0.31
APOA4P06727 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.01■□□□□ 0.31
APOA4P06727 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.01■□□□□ 0.31
APOA4P06727 AF238378.1-201ENST00000526806 358 ntBASIC17.01■□□□□ 0.31
APOA4P06727 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.01■□□□□ 0.31
APOA4P06727 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.01■□□□□ 0.31
APOA4P06727 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.01■□□□□ 0.31
APOA4P06727 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.01■□□□□ 0.31
APOA4P06727 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.01■□□□□ 0.31
APOA4P06727 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.01■□□□□ 0.31
APOA4P06727 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APOA4P06727 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.01■□□□□ 0.31
APOA4P06727 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.01■□□□□ 0.31
APOA4P06727 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APOA4P06727 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.01■□□□□ 0.31
APOA4P06727 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
APOA4P06727 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.01■□□□□ 0.31
APOA4P06727 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APOA4P06727 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOA4P06727 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOA4P06727 AC004817.3-201ENST00000602957 2129 ntBASIC17■□□□□ 0.31
APOA4P06727 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
APOA4P06727 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOA4P06727 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOA4P06727 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOA4P06727 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17■□□□□ 0.31
APOA4P06727 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOA4P06727 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOA4P06727 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms