Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AL391256.1-201ENST00000443260 1855 ntBASIC20.29■□□□□ 0.84
CHGBP05060 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.29■□□□□ 0.84
CHGBP05060 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.29■□□□□ 0.84
CHGBP05060 AC074386.1-202ENST00000463561 864 ntBASIC20.29■□□□□ 0.84
CHGBP05060 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.29■□□□□ 0.84
CHGBP05060 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
CHGBP05060 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 MIR4515-201ENST00000584082 81 ntBASIC20.29■□□□□ 0.84
CHGBP05060 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.29■□□□□ 0.84
CHGBP05060 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CHGBP05060 AL353732.1-201ENST00000569618 1459 ntBASIC20.29■□□□□ 0.84
CHGBP05060 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.29■□□□□ 0.84
CHGBP05060 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CHGBP05060 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHGBP05060 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.28■□□□□ 0.84
CHGBP05060 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC20.28■□□□□ 0.84
CHGBP05060 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.28■□□□□ 0.84
CHGBP05060 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CHGBP05060 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.28■□□□□ 0.84
CHGBP05060 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.28■□□□□ 0.84
CHGBP05060 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.28■□□□□ 0.84
CHGBP05060 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.28■□□□□ 0.84
CHGBP05060 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.28■□□□□ 0.84
CHGBP05060 AL031432.2-201ENST00000566714 459 ntBASIC20.28■□□□□ 0.84
CHGBP05060 AL928711.1-201ENST00000570165 459 ntBASIC20.28■□□□□ 0.84
CHGBP05060 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHGBP05060 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.28■□□□□ 0.84
CHGBP05060 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
CHGBP05060 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.28■□□□□ 0.84
CHGBP05060 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHGBP05060 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CHGBP05060 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 AC006277.1-201ENST00000624348 1610 ntBASIC20.27■□□□□ 0.84
CHGBP05060 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CHGBP05060 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.27■□□□□ 0.84
CHGBP05060 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHGBP05060 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CHGBP05060 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.27■□□□□ 0.84
CHGBP05060 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.27■□□□□ 0.84
CHGBP05060 UPF3AP3-201ENST00000420996 769 ntBASIC20.27■□□□□ 0.84
CHGBP05060 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.27■□□□□ 0.84
CHGBP05060 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.27■□□□□ 0.84
CHGBP05060 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.27■□□□□ 0.84
CHGBP05060 CYP2A7P1-201ENST00000595391 815 ntBASIC20.27■□□□□ 0.84
CHGBP05060 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.27■□□□□ 0.84
CHGBP05060 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.27■□□□□ 0.84
CHGBP05060 AC091812.2-201ENST00000619081 385 ntBASIC20.27■□□□□ 0.84
CHGBP05060 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 AC092902.6-201ENST00000641783 218 ntBASIC20.27■□□□□ 0.84
CHGBP05060 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHGBP05060 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHGBP05060 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CHGBP05060 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHGBP05060 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms