Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
TCRAP04437 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TCRAP04437 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TCRAP04437 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.94□□□□□ -0.34
TCRAP04437 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 AL353593.2-201ENST00000602529 1483 ntBASIC12.94□□□□□ -0.34
TCRAP04437 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TCRAP04437 FAM220CP-201ENST00000395253 831 ntBASIC12.94□□□□□ -0.34
TCRAP04437 HLA-J-202ENST00000469281 1241 ntBASIC12.94□□□□□ -0.34
TCRAP04437 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
TCRAP04437 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 MIR4497-201ENST00000583208 89 ntBASIC12.94□□□□□ -0.34
TCRAP04437 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TCRAP04437 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.94□□□□□ -0.34
TCRAP04437 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TCRAP04437 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.94□□□□□ -0.34
TCRAP04437 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 AC125634.1-201ENST00000438758 1403 ntBASIC12.94□□□□□ -0.34
TCRAP04437 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TCRAP04437 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TCRAP04437 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.93□□□□□ -0.34
TCRAP04437 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.93□□□□□ -0.34
TCRAP04437 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
TCRAP04437 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 AP006294.2-201ENST00000641667 209 ntBASIC12.93□□□□□ -0.34
TCRAP04437 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.93□□□□□ -0.34
TCRAP04437 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRAP04437 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRAP04437 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms