Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 ACTBP11-201ENST00000436287 1126 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 ELK1P1-201ENST00000485699 580 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 AC104989.1-201ENST00000519711 778 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 AC123567.1-201ENST00000548294 1261 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 MIR6787-201ENST00000616675 61 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 LINC00304-203ENST00000565008 1864 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 AC073439.1-201ENST00000624121 1774 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.11■□□□□ 0.65
ALDH1A1P00352 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ALDH1A1P00352 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.11■□□□□ 0.65
ALDH1A1P00352 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 SDHAP3-202ENST00000515467 728 ntBASIC19.1■□□□□ 0.65
ALDH1A1P00352 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 CTBP2P3-201ENST00000585629 1255 ntBASIC19.1■□□□□ 0.65
ALDH1A1P00352 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 AC068587.10-201ENST00000641210 219 ntBASIC19.1■□□□□ 0.65
ALDH1A1P00352 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.1■□□□□ 0.65
ALDH1A1P00352 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ALDH1A1P00352 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 AC092933.1-201ENST00000393644 945 ntBASIC19.09■□□□□ 0.65
ALDH1A1P00352 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 SPDYE18-201ENST00000510091 1050 ntBASIC19.09■□□□□ 0.65
ALDH1A1P00352 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 AC093726.1-201ENST00000608064 963 ntBASIC19.09■□□□□ 0.65
ALDH1A1P00352 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.09■□□□□ 0.65
ALDH1A1P00352 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ALDH1A1P00352 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.09■□□□□ 0.65
ALDH1A1P00352 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALDH1A1P00352 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALDH1A1P00352 KRT8P44-201ENST00000441609 1350 ntBASIC19.08■□□□□ 0.65
ALDH1A1P00352 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ALDH1A1P00352 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALDH1A1P00352 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALDH1A1P00352 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
ALDH1A1P00352 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ALDH1A1P00352 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.08■□□□□ 0.65
ALDH1A1P00352 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ALDH1A1P00352 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ALDH1A1P00352 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ALDH1A1P00352 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ALDH1A1P00352 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ALDH1A1P00352 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.08■□□□□ 0.64
ALDH1A1P00352 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ALDH1A1P00352 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.08■□□□□ 0.64
ALDH1A1P00352 TMEM14DP-201ENST00000422205 345 ntBASIC19.08■□□□□ 0.64
ALDH1A1P00352 KRT43P-201ENST00000434019 910 ntBASIC19.08■□□□□ 0.64
ALDH1A1P00352 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ALDH1A1P00352 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms