Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BEST1O76090 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BEST1O76090 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
BEST1O76090 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BEST1O76090 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST1O76090 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 SNX33P1-201ENST00000592116 1762 ntBASIC17.72■□□□□ 0.43
BEST1O76090 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
BEST1O76090 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.72■□□□□ 0.43
BEST1O76090 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
BEST1O76090 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.72■□□□□ 0.43
BEST1O76090 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.72■□□□□ 0.43
BEST1O76090 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.72■□□□□ 0.43
BEST1O76090 GPALPP1-207ENST00000611650 899 ntBASIC17.72■□□□□ 0.43
BEST1O76090 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.72■□□□□ 0.43
BEST1O76090 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
BEST1O76090 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST1O76090 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
BEST1O76090 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.72■□□□□ 0.43
BEST1O76090 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BEST1O76090 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BEST1O76090 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BEST1O76090 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BEST1O76090 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 ELL2P1-201ENST00000413990 1906 ntBASIC17.71■□□□□ 0.43
BEST1O76090 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST1O76090 MKNK2P1-201ENST00000437526 628 ntBASIC17.71■□□□□ 0.43
BEST1O76090 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST1O76090 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.71■□□□□ 0.43
BEST1O76090 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
BEST1O76090 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.71■□□□□ 0.43
BEST1O76090 AC099522.2-201ENST00000607001 744 ntBASIC17.71■□□□□ 0.43
BEST1O76090 AC134684.3-201ENST00000641758 218 ntBASIC17.71■□□□□ 0.43
BEST1O76090 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.71■□□□□ 0.43
BEST1O76090 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
BEST1O76090 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 AL391256.1-201ENST00000443260 1855 ntBASIC17.71■□□□□ 0.43
BEST1O76090 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BEST1O76090 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BEST1O76090 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BEST1O76090 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
BEST1O76090 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
BEST1O76090 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.71■□□□□ 0.42
BEST1O76090 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
BEST1O76090 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.71■□□□□ 0.42
BEST1O76090 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
BEST1O76090 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
BEST1O76090 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
BEST1O76090 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
BEST1O76090 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
BEST1O76090 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
BEST1O76090 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST1O76090 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 LINC00895-201ENST00000629028 1637 ntBASIC17.7■□□□□ 0.42
BEST1O76090 LTB4R2-202ENST00000528054 3092 ntBASIC17.7■□□□□ 0.42
BEST1O76090 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.7■□□□□ 0.42
BEST1O76090 RNU1-129P-201ENST00000384064 167 ntBASIC17.7■□□□□ 0.42
BEST1O76090 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.7■□□□□ 0.42
BEST1O76090 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.7■□□□□ 0.42
BEST1O76090 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.7■□□□□ 0.42
BEST1O76090 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.7■□□□□ 0.42
BEST1O76090 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
BEST1O76090 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.7■□□□□ 0.42
BEST1O76090 U1.21-201ENST00000580816 167 ntBASIC17.7■□□□□ 0.42
BEST1O76090 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.7■□□□□ 0.42
BEST1O76090 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.7■□□□□ 0.42
BEST1O76090 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
BEST1O76090 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
BEST1O76090 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms