Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RFPL1O75677 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
RFPL1O75677 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
RFPL1O75677 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFPL1O75677 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.03■□□□□ 0.32
RFPL1O75677 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RFPL1O75677 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.03■□□□□ 0.32
RFPL1O75677 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 HLA-A-201ENST00000376802 1334 ntBASIC17.03■□□□□ 0.32
RFPL1O75677 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.03■□□□□ 0.32
RFPL1O75677 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.03■□□□□ 0.32
RFPL1O75677 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.03■□□□□ 0.32
RFPL1O75677 AL590627.1-203ENST00000421194 1026 ntBASIC17.03■□□□□ 0.32
RFPL1O75677 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.03■□□□□ 0.32
RFPL1O75677 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.03■□□□□ 0.32
RFPL1O75677 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.03■□□□□ 0.32
RFPL1O75677 AP005901.3-202ENST00000581653 237 ntBASIC17.03■□□□□ 0.32
RFPL1O75677 AC073592.5-201ENST00000624854 528 ntBASIC17.03■□□□□ 0.32
RFPL1O75677 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFPL1O75677 AC007950.2-201ENST00000615045 2347 ntBASIC17.03■□□□□ 0.32
RFPL1O75677 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFPL1O75677 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFPL1O75677 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.02■□□□□ 0.32
RFPL1O75677 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.02■□□□□ 0.32
RFPL1O75677 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFPL1O75677 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.02■□□□□ 0.32
RFPL1O75677 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.02■□□□□ 0.32
RFPL1O75677 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.02■□□□□ 0.32
RFPL1O75677 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.02■□□□□ 0.32
RFPL1O75677 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RFPL1O75677 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.02■□□□□ 0.32
RFPL1O75677 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.02■□□□□ 0.32
RFPL1O75677 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.02■□□□□ 0.32
RFPL1O75677 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.02■□□□□ 0.32
RFPL1O75677 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.02■□□□□ 0.32
RFPL1O75677 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFPL1O75677 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFPL1O75677 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFPL1O75677 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFPL1O75677 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFPL1O75677 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFPL1O75677 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RFPL1O75677 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.02■□□□□ 0.31
RFPL1O75677 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFPL1O75677 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFPL1O75677 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.02■□□□□ 0.31
RFPL1O75677 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFPL1O75677 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFPL1O75677 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFPL1O75677 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RFPL1O75677 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFPL1O75677 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.01■□□□□ 0.31
RFPL1O75677 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.01■□□□□ 0.31
RFPL1O75677 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFPL1O75677 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
RFPL1O75677 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFPL1O75677 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.01■□□□□ 0.31
RFPL1O75677 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.01■□□□□ 0.31
RFPL1O75677 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFPL1O75677 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.01■□□□□ 0.31
RFPL1O75677 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms