Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
USH2AO75445 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC7.45□□□□□ -1.22
USH2AO75445 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
USH2AO75445 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
USH2AO75445 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
USH2AO75445 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USH2AO75445 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
USH2AO75445 SNX21-203ENST00000372541 771 ntTSL 2 BASIC7.45□□□□□ -1.22
USH2AO75445 RHOA-206ENST00000454011 889 ntTSL 2 BASIC7.45□□□□□ -1.22
USH2AO75445 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC7.45□□□□□ -1.22
USH2AO75445 RIT1-205ENST00000539040 919 ntTSL 2 BASIC7.45□□□□□ -1.22
USH2AO75445 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
USH2AO75445 SRD5A3P1-201ENST00000603021 949 ntBASIC7.45□□□□□ -1.22
USH2AO75445 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 REXO1L11P-201ENST00000620964 1927 ntBASIC7.44□□□□□ -1.22
USH2AO75445 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 AL662890.1-201ENST00000396818 632 ntBASIC7.44□□□□□ -1.22
USH2AO75445 WDR53-204ENST00000433160 887 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC7.44□□□□□ -1.22
USH2AO75445 CHMP4BP1-201ENST00000556017 588 ntBASIC7.44□□□□□ -1.22
USH2AO75445 PRKXP1-201ENST00000561423 1122 ntBASIC7.44□□□□□ -1.22
USH2AO75445 AC005695.3-201ENST00000614522 232 ntBASIC7.44□□□□□ -1.22
USH2AO75445 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
USH2AO75445 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 NOC2LP1-202ENST00000452600 2235 ntBASIC7.44□□□□□ -1.22
USH2AO75445 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC7.44□□□□□ -1.22
USH2AO75445 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC7.44□□□□□ -1.22
USH2AO75445 WT1-AS_2.1-201ENST00000613208 137 ntBASIC7.44□□□□□ -1.22
USH2AO75445 AL035456.1-201ENST00000456064 1369 ntBASIC7.44□□□□□ -1.22
USH2AO75445 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 AP000997.3-201ENST00000623333 2250 ntBASIC7.44□□□□□ -1.22
USH2AO75445 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC7.44□□□□□ -1.22
USH2AO75445 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
USH2AO75445 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
USH2AO75445 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC7.44□□□□□ -1.22
USH2AO75445 OARD1-212ENST00000482515 832 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 ADM-202ENST00000524948 584 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
USH2AO75445 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
USH2AO75445 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC7.44□□□□□ -1.22
USH2AO75445 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC7.44□□□□□ -1.22
USH2AO75445 AC104306.2-201ENST00000451877 341 ntBASIC7.44□□□□□ -1.22
USH2AO75445 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC7.44□□□□□ -1.22
USH2AO75445 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
USH2AO75445 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
USH2AO75445 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms