Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ZNF253O75346 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF253O75346 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF253O75346 ATP5G1P1-201ENST00000448724 379 ntBASIC13.28□□□□□ -0.28
ZNF253O75346 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.28□□□□□ -0.28
ZNF253O75346 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF253O75346 IGHV3-52-201ENST00000519770 353 ntBASIC13.28□□□□□ -0.28
ZNF253O75346 AC124947.2-201ENST00000547118 1133 ntBASIC13.28□□□□□ -0.28
ZNF253O75346 AL441883.1-201ENST00000566170 1045 ntBASIC13.28□□□□□ -0.28
ZNF253O75346 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF253O75346 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 AL513523.2-202ENST00000427283 2040 ntBASIC13.28□□□□□ -0.28
ZNF253O75346 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.28□□□□□ -0.28
ZNF253O75346 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
ZNF253O75346 AC099063.4-201ENST00000641099 1602 ntBASIC13.28□□□□□ -0.28
ZNF253O75346 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ZNF253O75346 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
ZNF253O75346 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF253O75346 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.27□□□□□ -0.28
ZNF253O75346 AC093525.9-201ENST00000624961 1746 ntBASIC13.27□□□□□ -0.28
ZNF253O75346 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF253O75346 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF253O75346 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.27□□□□□ -0.28
ZNF253O75346 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.27□□□□□ -0.28
ZNF253O75346 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.27□□□□□ -0.28
ZNF253O75346 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF253O75346 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF253O75346 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ZNF253O75346 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF253O75346 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ZNF253O75346 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ZNF253O75346 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF253O75346 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ZNF253O75346 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 SPDYE15P-201ENST00000424157 909 ntBASIC13.27□□□□□ -0.29
ZNF253O75346 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF253O75346 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.27□□□□□ -0.29
ZNF253O75346 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF253O75346 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF253O75346 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
ZNF253O75346 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
ZNF253O75346 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.27□□□□□ -0.29
ZNF253O75346 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
ZNF253O75346 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.27□□□□□ -0.29
ZNF253O75346 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF253O75346 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF253O75346 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 AC060834.1-201ENST00000443027 2032 ntBASIC13.27□□□□□ -0.29
ZNF253O75346 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZNF253O75346 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.27□□□□□ -0.29
ZNF253O75346 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF253O75346 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.26□□□□□ -0.29
ZNF253O75346 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.26□□□□□ -0.29
ZNF253O75346 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZNF253O75346 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms