Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDH7O60245 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH7O60245 AC139887.3-201ENST00000568585 713 ntBASIC16.21■□□□□ 0.19
PCDH7O60245 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH7O60245 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH7O60245 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDH7O60245 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 AC012313.10-201ENST00000623509 926 ntBASIC16.21■□□□□ 0.19
PCDH7O60245 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
PCDH7O60245 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH7O60245 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH7O60245 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH7O60245 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
PCDH7O60245 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH7O60245 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH7O60245 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH7O60245 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH7O60245 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.18
PCDH7O60245 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH7O60245 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH7O60245 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH7O60245 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH7O60245 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH7O60245 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH7O60245 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PCDH7O60245 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH7O60245 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDH7O60245 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDH7O60245 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDH7O60245 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
PCDH7O60245 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDH7O60245 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDH7O60245 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDH7O60245 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH7O60245 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.2■□□□□ 0.18
PCDH7O60245 CLEC4GP1-201ENST00000596555 870 ntBASIC16.2■□□□□ 0.18
PCDH7O60245 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDH7O60245 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH7O60245 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH7O60245 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDH7O60245 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDH7O60245 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH7O60245 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDH7O60245 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH7O60245 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH7O60245 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDH7O60245 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PCDH7O60245 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH7O60245 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH7O60245 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 AL603756.1-201ENST00000606511 2163 ntBASIC16.19■□□□□ 0.18
PCDH7O60245 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH7O60245 AL391256.1-201ENST00000443260 1855 ntBASIC16.19■□□□□ 0.18
PCDH7O60245 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH7O60245 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDH7O60245 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDH7O60245 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDH7O60245 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDH7O60245 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDH7O60245 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDH7O60245 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDH7O60245 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDH7O60245 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDH7O60245 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms