Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.98■□□□□ 0.95
SRGAP3O43295 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SRGAP3O43295 AC004832.2-201ENST00000426397 482 ntBASIC20.98■□□□□ 0.95
SRGAP3O43295 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
SRGAP3O43295 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.98■□□□□ 0.95
SRGAP3O43295 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SRGAP3O43295 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.98■□□□□ 0.95
SRGAP3O43295 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.98■□□□□ 0.95
SRGAP3O43295 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.98■□□□□ 0.95
SRGAP3O43295 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
SRGAP3O43295 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SRGAP3O43295 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.98■□□□□ 0.95
SRGAP3O43295 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.98■□□□□ 0.95
SRGAP3O43295 AC012569.1-201ENST00000591191 1524 ntBASIC20.98■□□□□ 0.95
SRGAP3O43295 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRGAP3O43295 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.98■□□□□ 0.95
SRGAP3O43295 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SRGAP3O43295 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.97■□□□□ 0.95
SRGAP3O43295 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SRGAP3O43295 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.97■□□□□ 0.95
SRGAP3O43295 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 HMGA1P7-201ENST00000406908 502 ntBASIC20.97■□□□□ 0.95
SRGAP3O43295 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.97■□□□□ 0.95
SRGAP3O43295 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.97■□□□□ 0.95
SRGAP3O43295 AL645728.2-201ENST00000641974 660 ntBASIC20.97■□□□□ 0.95
SRGAP3O43295 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
SRGAP3O43295 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
SRGAP3O43295 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 RNF216P1-203ENST00000404404 2427 ntBASIC20.97■□□□□ 0.95
SRGAP3O43295 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.97■□□□□ 0.95
SRGAP3O43295 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SRGAP3O43295 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.97■□□□□ 0.95
SRGAP3O43295 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRGAP3O43295 AC092919.2-201ENST00000623631 1645 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SRGAP3O43295 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SRGAP3O43295 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SRGAP3O43295 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.96■□□□□ 0.95
SRGAP3O43295 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.96■□□□□ 0.95
SRGAP3O43295 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.96■□□□□ 0.95
SRGAP3O43295 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.96■□□□□ 0.95
SRGAP3O43295 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.96■□□□□ 0.95
SRGAP3O43295 YBX2P1-201ENST00000394192 760 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.96■□□□□ 0.95
SRGAP3O43295 HCG4-201ENST00000418983 998 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 AC074386.1-202ENST00000463561 864 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.96■□□□□ 0.95
SRGAP3O43295 AC087641.1-201ENST00000557561 1021 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 AL031432.2-201ENST00000566714 459 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.96■□□□□ 0.95
SRGAP3O43295 AL928711.1-201ENST00000570165 459 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.96■□□□□ 0.95
SRGAP3O43295 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.96■□□□□ 0.95
SRGAP3O43295 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SRGAP3O43295 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SRGAP3O43295 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.96■□□□□ 0.95
SRGAP3O43295 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SRGAP3O43295 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.96■□□□□ 0.95
SRGAP3O43295 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SRGAP3O43295 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.96■□□□□ 0.95
SRGAP3O43295 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 AC006277.1-201ENST00000624348 1610 ntBASIC20.96■□□□□ 0.95
SRGAP3O43295 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRGAP3O43295 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.95■□□□□ 0.94
SRGAP3O43295 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms