Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.32■■□□□ 1
NPHP1O15259 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.32■■□□□ 1
NPHP1O15259 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.32■■□□□ 1
NPHP1O15259 MIR6080-201ENST00000617359 66 ntBASIC21.32■■□□□ 1
NPHP1O15259 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.32■■□□□ 1
NPHP1O15259 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NPHP1O15259 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
NPHP1O15259 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
NPHP1O15259 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.31■■□□□ 1
NPHP1O15259 AC063926.2-201ENST00000623766 1308 ntBASIC21.31■■□□□ 1
NPHP1O15259 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
NPHP1O15259 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.31■■□□□ 1
NPHP1O15259 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.31■■□□□ 1
NPHP1O15259 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.31■■□□□ 1
NPHP1O15259 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.31■■□□□ 1
NPHP1O15259 SLC25A39P2-201ENST00000537614 270 ntBASIC21.31■■□□□ 1
NPHP1O15259 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.31■■□□□ 1
NPHP1O15259 AC140878.1-201ENST00000565277 250 ntBASIC21.31■■□□□ 1
NPHP1O15259 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.31■■□□□ 1
NPHP1O15259 AL009183.1-201ENST00000603760 355 ntBASIC21.31■■□□□ 1
NPHP1O15259 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.31■■□□□ 1
NPHP1O15259 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NPHP1O15259 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NPHP1O15259 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 AC008677.1-201ENST00000519230 1561 ntBASIC21.31■■□□□ 1
NPHP1O15259 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NPHP1O15259 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.31■■□□□ 1
NPHP1O15259 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.31■■□□□ 1
NPHP1O15259 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHP1O15259 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.31■■□□□ 1
NPHP1O15259 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NPHP1O15259 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NPHP1O15259 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
NPHP1O15259 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.3■■□□□ 1
NPHP1O15259 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.3■■□□□ 1
NPHP1O15259 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.3■■□□□ 1
NPHP1O15259 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.3■■□□□ 1
NPHP1O15259 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.3■■□□□ 1
NPHP1O15259 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.3■■□□□ 1
NPHP1O15259 AC026150.2-201ENST00000564693 1156 ntBASIC21.3■■□□□ 1
NPHP1O15259 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.3■■□□□ 1
NPHP1O15259 RN7SL204P-201ENST00000582831 262 ntBASIC21.3■■□□□ 1
NPHP1O15259 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NPHP1O15259 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.3■■□□□ 1
NPHP1O15259 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
NPHP1O15259 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.3■■□□□ 1
NPHP1O15259 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NPHP1O15259 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPHP1O15259 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NPHP1O15259 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.29■■□□□ 1
NPHP1O15259 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.29■■□□□ 1
NPHP1O15259 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
NPHP1O15259 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.29■■□□□ 1
NPHP1O15259 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NPHP1O15259 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NPHP1O15259 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPHP1O15259 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.29■■□□□ 1
NPHP1O15259 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.29■■□□□ 1
NPHP1O15259 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPHP1O15259 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.29■■□□□ 1
NPHP1O15259 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPHP1O15259 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NPHP1O15259 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NPHP1O15259 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPHP1O15259 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms