Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A1O14983 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A1O14983 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A1O14983 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A1O14983 GNAS-203ENST00000306120 1878 ntBASIC19.33■□□□□ 0.69
ATP2A1O14983 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ATP2A1O14983 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2A1O14983 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2A1O14983 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
ATP2A1O14983 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2A1O14983 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A1O14983 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2A1O14983 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A1O14983 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A1O14983 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
ATP2A1O14983 AC134043.2-201ENST00000624206 2238 ntBASIC19.33■□□□□ 0.68
ATP2A1O14983 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
ATP2A1O14983 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
ATP2A1O14983 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ATP2A1O14983 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ATP2A1O14983 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
ATP2A1O14983 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2A1O14983 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2A1O14983 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2A1O14983 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 AL021920.2-201ENST00000624828 1351 ntBASIC19.32■□□□□ 0.68
ATP2A1O14983 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A1O14983 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A1O14983 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A1O14983 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATP2A1O14983 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ATP2A1O14983 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 MIR346-201ENST00000362234 95 ntBASIC19.32■□□□□ 0.68
ATP2A1O14983 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
ATP2A1O14983 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A1O14983 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A1O14983 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A1O14983 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
ATP2A1O14983 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A1O14983 IGHV3-62-201ENST00000520057 340 ntBASIC19.32■□□□□ 0.68
ATP2A1O14983 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A1O14983 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A1O14983 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 AC008267.7-201ENST00000624570 1194 ntBASIC19.32■□□□□ 0.68
ATP2A1O14983 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A1O14983 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A1O14983 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A1O14983 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A1O14983 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A1O14983 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
ATP2A1O14983 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A1O14983 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP2A1O14983 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A1O14983 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2A1O14983 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP2A1O14983 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2A1O14983 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.31■□□□□ 0.68
ATP2A1O14983 AL390955.2-201ENST00000603032 514 ntBASIC19.31■□□□□ 0.68
ATP2A1O14983 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms