Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 PCDHA14-201ENST00000506751 2298 ntBASIC16.22■□□□□ 0.19
PCDH17O14917 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 AC097637.2-201ENST00000624096 1997 ntBASIC16.22■□□□□ 0.19
PCDH17O14917 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 AC105020.1-201ENST00000435356 2205 ntBASIC16.22■□□□□ 0.19
PCDH17O14917 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH17O14917 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDH17O14917 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 AC009947.1-201ENST00000444350 727 ntBASIC16.22■□□□□ 0.19
PCDH17O14917 RNA5SP416-201ENST00000516838 111 ntBASIC16.22■□□□□ 0.19
PCDH17O14917 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH17O14917 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH17O14917 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PCDH17O14917 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCDH17O14917 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH17O14917 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDH17O14917 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PCDH17O14917 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDH17O14917 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH17O14917 AC046158.3-201ENST00000624947 2558 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDH17O14917 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH17O14917 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH17O14917 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH17O14917 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PCDH17O14917 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH17O14917 ELK2BP-201ENST00000415014 1224 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 LINC00982-205ENST00000420957 435 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH17O14917 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH17O14917 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 AC108751.1-201ENST00000490852 363 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 RPS15P9-201ENST00000494093 319 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 IGHV3-65-201ENST00000523210 341 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
PCDH17O14917 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH17O14917 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDH17O14917 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH17O14917 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH17O14917 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH17O14917 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDH17O14917 AC008894.3-201ENST00000624324 3103 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH17O14917 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 AC046185.3-201ENST00000623228 1824 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 PCDHB19P-201ENST00000570871 2371 ntBASIC16.21■□□□□ 0.19
PCDH17O14917 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH17O14917 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH17O14917 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH17O14917 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH17O14917 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH17O14917 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDH17O14917 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDH17O14917 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDH17O14917 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms