Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
DDX39AO00148 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
DDX39AO00148 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
DDX39AO00148 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX39AO00148 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.04■□□□□ 0.64
DDX39AO00148 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.04■□□□□ 0.64
DDX39AO00148 AL031432.2-201ENST00000566714 459 ntBASIC19.04■□□□□ 0.64
DDX39AO00148 AL928711.1-201ENST00000570165 459 ntBASIC19.04■□□□□ 0.64
DDX39AO00148 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 AL596442.2-201ENST00000610240 980 ntBASIC19.04■□□□□ 0.64
DDX39AO00148 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.04■□□□□ 0.64
DDX39AO00148 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.04■□□□□ 0.64
DDX39AO00148 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
DDX39AO00148 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
DDX39AO00148 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDX39AO00148 AC060834.1-201ENST00000443027 2032 ntBASIC19.03■□□□□ 0.64
DDX39AO00148 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX39AO00148 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.03■□□□□ 0.64
DDX39AO00148 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
DDX39AO00148 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
DDX39AO00148 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.03■□□□□ 0.64
DDX39AO00148 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.03■□□□□ 0.64
DDX39AO00148 AC005412.3-201ENST00000580309 715 ntBASIC19.03■□□□□ 0.64
DDX39AO00148 SLC22A20-204ENST00000530038 1673 ntBASIC19.03■□□□□ 0.64
DDX39AO00148 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
DDX39AO00148 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDX39AO00148 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDX39AO00148 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX39AO00148 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX39AO00148 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX39AO00148 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX39AO00148 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
DDX39AO00148 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX39AO00148 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX39AO00148 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DDX39AO00148 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.02■□□□□ 0.64
DDX39AO00148 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DDX39AO00148 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
DDX39AO00148 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.02■□□□□ 0.64
DDX39AO00148 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.02■□□□□ 0.64
DDX39AO00148 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX39AO00148 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
DDX39AO00148 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.02■□□□□ 0.64
DDX39AO00148 AP002472.1-201ENST00000577490 586 ntBASIC19.02■□□□□ 0.64
DDX39AO00148 MIR4515-201ENST00000584082 81 ntBASIC19.02■□□□□ 0.64
DDX39AO00148 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.02■□□□□ 0.64
DDX39AO00148 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DDX39AO00148 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
DDX39AO00148 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX39AO00148 TOP3BP1-201ENST00000420768 1380 ntBASIC19.02■□□□□ 0.64
DDX39AO00148 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
DDX39AO00148 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.02■□□□□ 0.64
DDX39AO00148 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.02■□□□□ 0.63
DDX39AO00148 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
DDX39AO00148 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DDX39AO00148 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.02■□□□□ 0.63
DDX39AO00148 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DDX39AO00148 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DDX39AO00148 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
DDX39AO00148 ELL2P1-201ENST00000413990 1906 ntBASIC19.02■□□□□ 0.63
DDX39AO00148 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
DDX39AO00148 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX39AO00148 AC012569.1-201ENST00000591191 1524 ntBASIC19.01■□□□□ 0.63
DDX39AO00148 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX39AO00148 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX39AO00148 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms