Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 MYCLP1-201ENST00000372451 1075 ntBASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 COX5BP2-201ENST00000392354 334 ntBASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 AL023973.1-201ENST00000624619 620 ntBASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MEIS3P1A6NDR6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MEIS3P1A6NDR6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 FRMD8P1-201ENST00000440433 1524 ntBASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 AL353692.3-201ENST00000407031 1396 ntBASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
MEIS3P1A6NDR6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
MEIS3P1A6NDR6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms