Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 CICP14-201ENST00000629111 2732 ntBASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 AL121672.3-201ENST00000608644 468 ntBASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HTR3EA5X5Y0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 AL353593.2-201ENST00000602529 1483 ntBASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HTR3EA5X5Y0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 AL122018.1-201ENST00000446607 2310 ntBASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HTR3EA5X5Y0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HTR3EA5X5Y0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HTR3EA5X5Y0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.77■□□□□ 0.11
HTR3EA5X5Y0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HTR3EA5X5Y0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
HTR3EA5X5Y0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
HTR3EA5X5Y0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.77■□□□□ 0.11
HTR3EA5X5Y0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
HTR3EA5X5Y0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms