Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV9S1A1TA0A576 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 LINC00265-3P-201ENST00000447588 903 ntBASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 AC022188.1-201ENST00000620960 1664 ntBASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRBV9S1A1TA0A576 AC132872.4-202ENST00000622924 2756 ntBASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.08■□□□□ 0.33
TCRBV9S1A1TA0A576 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 KRT8P49-201ENST00000604166 1432 ntBASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.08■□□□□ 0.32
TCRBV9S1A1TA0A576 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 MTHFR-217ENST00000641820 1569 ntBASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
TCRBV9S1A1TA0A576 AC074051.2-201ENST00000565115 352 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms